3onf: Difference between revisions

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 ==Crystal structure of Lupinus luteus S-adenosyl-L-homocysteine hydrolase in complex with cordycepin==
-<StructureSection load='3onf' size='340' side='right' caption='[[3onf]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+<StructureSection load='3onf' size='340' side='right'caption='[[3onf]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3onf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/European_yellow_lupin European yellow lupin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ONF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ONF FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3onf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lupinus_luteus Lupinus luteus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ONF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ONF FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3AD:3-DEOXYADENOSINE'>3AD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1a7a|1a7a]], [[1b3r|1b3r]], [[1v8b|1v8b]], [[3ce6|3ce6]], [[3ond|3ond]], [[3one|3one]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3AD:3-DEOXYADENOSINE'>3AD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SAHH, SHH, ssh-1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3873 European yellow lupin])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3onf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3onf OCA], [https://pdbe.org/3onf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3onf RCSB], [https://www.ebi.ac.uk/pdbsum/3onf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3onf ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenosylhomocysteinase Adenosylhomocysteinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.3.1.1 3.3.1.1] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3onf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3onf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3onf RCSB], [http://www.ebi.ac.uk/pdbsum/3onf PDBsum]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/SAHH_LUPLU SAHH_LUPLU]] Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine (By similarity).
+[https://www.uniprot.org/uniprot/SAHH_LUPLU SAHH_LUPLU] Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine (By similarity).
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
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 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 3onf" style="background-color:#fffaf0;"></div>
 ==See Also==
@@ Line 26: / Line 26: @@
 __TOC__
 </StructureSection>
-[[Category: Adenosylhomocysteinase]]
+[[Category: Large Structures]]
-[[Category: European yellow lupin]]
+[[Category: Lupinus luteus]]
-[[Category: Brzezinski, K]]
+[[Category: Brzezinski K]]
-[[Category: Jaskolski, M]]
+[[Category: Jaskolski M]]
-[[Category: Enzyme-inhibitor complex]]
-[[Category: Hydrolase-hydrolase inhibitor complex]]
-[[Category: Nad cofactor]]
-[[Category: Plant protein]]
-[[Category: Regulation of sam-dependent methylation reaction]]