3oj6: Difference between revisions

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-{{Seed}}
-[[Image:3oj6.jpg|left|200px]]
-<!--
+==Crystal structure of Blasticidin S Deaminase from Coccidioides Immitis==
-The line below this paragraph, containing "STRUCTURE_3oj6", creates the "Structure Box" on the page.
+<StructureSection load='3oj6' size='340' side='right'caption='[[3oj6]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3oj6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Coccidioides_immitis Coccidioides immitis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OJ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OJ6 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-{{STRUCTURE_3oj6|  PDB=3oj6  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3oj6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oj6 OCA], [https://pdbe.org/3oj6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3oj6 RCSB], [https://www.ebi.ac.uk/pdbsum/3oj6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3oj6 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/BSD_COCIM BSD_COCIM] Catalyzes the deamination of the cytosine moiety of the antibiotics blasticidin S, cytomycin and acetylblasticidin S.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oj/3oj6_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3oj6 ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of Blasticidin S Deaminase from Coccidioides Immitis===
+==See Also==
+*[[Deaminase 3D structures|Deaminase 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-OJ6 is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Coccidioides_immitis Coccidioides immitis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OJ6 OCA].
-[[Category: Blasticidin-S deaminase]]
 [[Category: Coccidioides immitis]]
-[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]
+[[Category: Large Structures]]
-[[Category: Blasticidin s deaminase]]
-[[Category: Hydrolase]]
-[[Category: Seattle structural genomics center for infectious disease]]
-[[Category: Ssgcid]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 15 10:55:45 2010''