3o9p: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==The structure of the Escherichia coli murein tripeptide binding protein MppA==
-<StructureSection load='3o9p' size='340' side='right' caption='[[3o9p]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
+<StructureSection load='3o9p' size='340' side='right'caption='[[3o9p]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3o9p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O9P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3O9P FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3o9p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O9P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3O9P FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MHI:L-ALA-GAMMA-D-GLU-MESO-DIAMINOPIMELIC+ACID'>MHI</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.07&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b1329, JW1322, mppA, ynaH ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MHI:L-ALA-GAMMA-D-GLU-MESO-DIAMINOPIMELIC+ACID'>MHI</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3o9p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o9p OCA], [http://pdbe.org/3o9p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3o9p RCSB], [http://www.ebi.ac.uk/pdbsum/3o9p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3o9p ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3o9p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o9p OCA], [https://pdbe.org/3o9p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3o9p RCSB], [https://www.ebi.ac.uk/pdbsum/3o9p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3o9p ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/MPPA_ECOLI MPPA_ECOLI]] Essential for the uptake of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate. Also transports some alpha-linked peptides such as Pro-Phe-Lys with low affinity. The transport is effected by the oligopeptide permease system.
+[https://www.uniprot.org/uniprot/MPPA_ECOLI MPPA_ECOLI] Essential for the uptake of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate. Also transports some alpha-linked peptides such as Pro-Phe-Lys with low affinity. The transport is effected by the oligopeptide permease system.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 23: / Line 23: @@
 __TOC__
 </StructureSection>
-[[Category: Bacillus coli migula 1895]]
+[[Category: Escherichia coli]]
-[[Category: Blagova, E V]]
+[[Category: Large Structures]]
-[[Category: Levdikov, V M]]
+[[Category: Blagova EV]]
-[[Category: Maqbool, A]]
+[[Category: Levdikov VM]]
-[[Category: Thomas, G H]]
+[[Category: Maqbool A]]
-[[Category: Wilkinson, A J]]
+[[Category: Thomas GH]]
-[[Category: Murein tripeptide]]
+[[Category: Wilkinson AJ]]
-[[Category: Oligopeptide binding protein]]
-[[Category: Peptide binding protein-peptide complex]]
-[[Category: Periplasmic protein]]