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{{STRUCTURE_3lgx|  PDB=3lgx  |  SCENE=  }}
===Structure of probable D-alanine-poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes with ATP===


==Function==
==Structure of probable D-alanine-poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes with ATP==
[[http://www.uniprot.org/uniprot/DLTA_STRP1 DLTA_STRP1]] Involved in the biosynthesis of D-alanyl-lipoteichoic acid (LTA). Catalyzes an ATP-dependent two-step reaction where it forms a high energy D-alanyl AMP intermediate and transfers the alanyl residues from AMP to Dcp (By similarity).  
<StructureSection load='3lgx' size='340' side='right'caption='[[3lgx]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
 
== Structural highlights ==
==About this Structure==
<table><tr><td colspan='2'>[[3lgx]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_M1_GAS Streptococcus pyogenes M1 GAS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LGX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LGX FirstGlance]. <br>
[[3lgx]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes Streptococcus pyogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LGX OCA].  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
[[Category: Streptococcus pyogenes]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene></td></tr>
[[Category: Almo, S C.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lgx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lgx OCA], [https://pdbe.org/3lgx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lgx RCSB], [https://www.ebi.ac.uk/pdbsum/3lgx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lgx ProSAT]</span></td></tr>
[[Category: Burley, S K.]]
</table>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
== Function ==
[[Category: Ramagopal, U A.]]
[https://www.uniprot.org/uniprot/DLTA_STRP1 DLTA_STRP1] Involved in the biosynthesis of D-alanyl-lipoteichoic acid (LTA). Catalyzes an ATP-dependent two-step reaction where it forms a high energy D-alanyl AMP intermediate and transfers the alanyl residues from AMP to Dcp (By similarity).
[[Category: Toro, R.]]
== Evolutionary Conservation ==
[[Category: Atp binding protein]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Atp-binding]]
Check<jmol>
[[Category: New york sgx research center for structural genomic]]
  <jmolCheckbox>
[[Category: Nucleotide-binding]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lg/3lgx_consurf.spt"</scriptWhenChecked>
[[Category: Nysgxrc]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Protein structure initiative]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Psi-2]]
  </jmolCheckbox>
[[Category: Structural genomic]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lgx ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Streptococcus pyogenes M1 GAS]]
[[Category: Almo SC]]
[[Category: Burley SK]]
[[Category: Ramagopal UA]]
[[Category: Toro R]]

Latest revision as of 11:36, 6 September 2023

Structure of probable D-alanine-poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes with ATPStructure of probable D-alanine-poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes with ATP

Structural highlights

3lgx is a 4 chain structure with sequence from Streptococcus pyogenes M1 GAS. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.6Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

DLTA_STRP1 Involved in the biosynthesis of D-alanyl-lipoteichoic acid (LTA). Catalyzes an ATP-dependent two-step reaction where it forms a high energy D-alanyl AMP intermediate and transfers the alanyl residues from AMP to Dcp (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3lgx, resolution 2.60Å

Drag the structure with the mouse to rotate

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OCA
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