3ldv: Difference between revisions
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== | ==1.77 Angstrom resolution crystal structure of orotidine 5'-phosphate decarboxylase from Vibrio cholerae O1 biovar eltor str. N16961== | ||
[[http://www.uniprot.org/uniprot/PYRF_VIBCH PYRF_VIBCH | <StructureSection load='3ldv' size='340' side='right'caption='[[3ldv]], [[Resolution|resolution]] 1.77Å' scene=''> | ||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3ldv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LDV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LDV FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.77Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ldv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ldv OCA], [https://pdbe.org/3ldv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ldv RCSB], [https://www.ebi.ac.uk/pdbsum/3ldv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ldv ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/PYRF_VIBCH PYRF_VIBCH] Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP) (By similarity). | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ld/3ldv_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ldv ConSurf]. | |||
<div style="clear:both"></div> | |||
== | ==See Also== | ||
[[ | *[[Uridine 5'-monophosphate synthase 3D structures|Uridine 5'-monophosphate synthase 3D structures]] | ||
[[Category: | __TOC__ | ||
[[Category: Vibrio cholerae | </StructureSection> | ||
[[Category: Anderson | [[Category: Large Structures]] | ||
[[Category: Vibrio cholerae O1 biovar El Tor str. N16961]] | |||
[[Category: Dubrovska | [[Category: Anderson WF]] | ||
[[Category: Glass | [[Category: Dubrovska I]] | ||
[[Category: Halavaty | [[Category: Glass EM]] | ||
[[Category: Minasov | [[Category: Halavaty AS]] | ||
[[Category: Peterson | [[Category: Minasov G]] | ||
[[Category: Shuvalova | [[Category: Peterson SN]] | ||
[[Category: Winsor | [[Category: Shuvalova L]] | ||
[[Category: Winsor J]] | |||
Latest revision as of 11:35, 6 September 2023
1.77 Angstrom resolution crystal structure of orotidine 5'-phosphate decarboxylase from Vibrio cholerae O1 biovar eltor str. N169611.77 Angstrom resolution crystal structure of orotidine 5'-phosphate decarboxylase from Vibrio cholerae O1 biovar eltor str. N16961
Structural highlights
FunctionPYRF_VIBCH Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP) (By similarity). Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. See Also |
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