3kwm: Difference between revisions

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 ==Crystal structure of ribose-5-isomerase A==
-<StructureSection load='3kwm' size='340' side='right' caption='[[3kwm]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
+<StructureSection load='3kwm' size='340' side='right'caption='[[3kwm]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3kwm]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Francisella_tularensis_subsp._tularensis Francisella tularensis subsp. tularensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KWM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KWM FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3kwm]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Francisella_tularensis_subsp._tularensis Francisella tularensis subsp. tularensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KWM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KWM FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3GR:GLYCERALDEHYDE'>3GR</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene><br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.32&#8491;</td></tr>
-<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FTT1208, FTW_1255, rpiA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119856 Francisella tularensis subsp. tularensis])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3GR:GLYCERALDEHYDE'>3GR</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kwm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kwm OCA], [https://pdbe.org/3kwm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kwm RCSB], [https://www.ebi.ac.uk/pdbsum/3kwm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kwm ProSAT]</span></td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kwm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kwm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3kwm RCSB], [http://www.ebi.ac.uk/pdbsum/3kwm PDBsum]</span></td></tr>
+</table>
-<table>
+== Function ==
+[https://www.uniprot.org/uniprot/RPIA_FRATT RPIA_FRATT]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kw/3kwm_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kw/3kwm_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kwm ConSurf].
 <div style="clear:both"></div>
 ==See Also==
-*[[Ribose-5-phosphate isomerase|Ribose-5-phosphate isomerase]]
+*[[Ribose-5-phosphate isomerase 3D structures|Ribose-5-phosphate isomerase 3D structures]]
 __TOC__
 </StructureSection>
 [[Category: Francisella tularensis subsp. tularensis]]
-[[Category: Ribose-5-phosphate isomerase]]
+[[Category: Large Structures]]
-[[Category: Borek, D.]]
+[[Category: Borek D]]
-[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
+[[Category: Grimshaw S]]
-[[Category: Grimshaw, S.]]
+[[Category: Hattne J]]
-[[Category: Hattne, J.]]
+[[Category: Nakka C]]
-[[Category: Nakka, C.]]
+[[Category: Orlikowska M]]
-[[Category: Orlikowska, M.]]
+[[Category: Otwinowski Z]]
-[[Category: Otwinowski, Z.]]
+[[Category: Rostankowski R]]
-[[Category: Rostankowski, R.]]
-[[Category: Center for structural genomics of infectious disease]]
-[[Category: Csgid]]
-[[Category: Idp02119]]
-[[Category: Isomerase]]
-[[Category: Structural genomic]]