3kof: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==Crystal structure of the double mutant F178Y/R181E of E.coli transaldolase B==
-<StructureSection load='3kof' size='340' side='right' caption='[[3kof]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+<StructureSection load='3kof' size='340' side='right'caption='[[3kof]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3kof]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KOF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KOF FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3kof]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KOF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KOF FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3cwn|3cwn]], [[1onr|1onr]], [[1i2n|1i2n]], [[1i2o|1i2o]], [[1i2p|1i2p]], [[1ucw|1ucw]], [[1i2r|1i2r]], [[1i2q|1i2q]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">talB, yaaK, b0008, JW0007 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kof FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kof OCA], [https://pdbe.org/3kof PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kof RCSB], [https://www.ebi.ac.uk/pdbsum/3kof PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kof ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Transaldolase Transaldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.2.1.2 2.2.1.2] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kof FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kof OCA], [http://pdbe.org/3kof PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kof RCSB], [http://www.ebi.ac.uk/pdbsum/3kof PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kof ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/TALB_ECOLI TALB_ECOLI]] Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.[HAMAP-Rule:MF_00492]
+[https://www.uniprot.org/uniprot/TALB_ECOLI TALB_ECOLI] Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.[HAMAP-Rule:MF_00492]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 33: / Line 31: @@
 ==See Also==
-*[[Transaldolase|Transaldolase]]
+*[[Transaldolase 3D structures|Transaldolase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Ecoli]]
+[[Category: Escherichia coli K-12]]
-[[Category: Transaldolase]]
+[[Category: Large Structures]]
-[[Category: Clapes, P]]
+[[Category: Clapes P]]
-[[Category: Gutierrez, M]]
+[[Category: Gutierrez M]]
-[[Category: Samland, A K]]
+[[Category: Samland AK]]
-[[Category: Sandalova, T]]
+[[Category: Sandalova T]]
-[[Category: Schneider, G]]
+[[Category: Schneider G]]
-[[Category: Schneider, S]]
+[[Category: Schneider S]]
-[[Category: Sprenger, G A]]
+[[Category: Sprenger GA]]
-[[Category: Aldolase]]
-[[Category: Cytoplasm]]
-[[Category: Directed evolution]]
-[[Category: Pentose shunt]]
-[[Category: Transferase]]