3hdp: Difference between revisions

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[[Image:3hdp.jpg|left|200px]]


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==Crystal structure of the NI(II)-bound Glyoxalase-I from Clostridium acetobutylicum==
The line below this paragraph, containing "STRUCTURE_3hdp", creates the "Structure Box" on the page.
<StructureSection load='3hdp' size='340' side='right'caption='[[3hdp]], [[Resolution|resolution]] 2.06&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3hdp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_acetobutylicum Clostridium acetobutylicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HDP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HDP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.06&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
{{STRUCTURE_3hdp| PDB=3hdp |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hdp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hdp OCA], [https://pdbe.org/3hdp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hdp RCSB], [https://www.ebi.ac.uk/pdbsum/3hdp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hdp ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q97H22_CLOAB Q97H22_CLOAB]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hd/3hdp_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hdp ConSurf].
<div style="clear:both"></div>


===Crystal structure of the NI(II)-bound Glyoxalase-I from Clostridium acetobutylicum===
==See Also==
 
*[[Glyoxalase 3D structures|Glyoxalase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3HDP is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_acetobutylicum Clostridium acetobutylicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HDP OCA].
[[Category: Clostridium acetobutylicum]]
[[Category: Clostridium acetobutylicum]]
[[Category: Lactoylglutathione lyase]]
[[Category: Large Structures]]
[[Category: Burley,S K.]]
[[Category: Burley SK]]
[[Category: Eswaramoorthy,S.]]
[[Category: Eswaramoorthy S]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Satyanarayana L]]
[[Category: Satyanarayana,L.]]
[[Category: Swaminathan S]]
[[Category: Swaminathan,S.]]
[[Category: 11003p]]
[[Category: Glutathione]]
[[Category: Glyoxalase]]
[[Category: Lyase]]
[[Category: Methylglyoxal]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Nysgxrc.]]
[[Category: Protein structure initiative]]
[[Category: Psi2]]
[[Category: Structural genomic]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 27 15:30:06 2009''

Latest revision as of 10:20, 6 September 2023

Crystal structure of the NI(II)-bound Glyoxalase-I from Clostridium acetobutylicumCrystal structure of the NI(II)-bound Glyoxalase-I from Clostridium acetobutylicum

Structural highlights

3hdp is a 1 chain structure with sequence from Clostridium acetobutylicum. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.06Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q97H22_CLOAB

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3hdp, resolution 2.06Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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