3hdp: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:


==Crystal structure of the NI(II)-bound Glyoxalase-I from Clostridium acetobutylicum==
==Crystal structure of the NI(II)-bound Glyoxalase-I from Clostridium acetobutylicum==
<StructureSection load='3hdp' size='340' side='right' caption='[[3hdp]], [[Resolution|resolution]] 2.06&Aring;' scene=''>
<StructureSection load='3hdp' size='340' side='right'caption='[[3hdp]], [[Resolution|resolution]] 2.06&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3hdp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"clostridium_acetobutyricum"_prevot_1940 "clostridium acetobutyricum" prevot 1940]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HDP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HDP FirstGlance]. <br>
<table><tr><td colspan='2'>[[3hdp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_acetobutylicum Clostridium acetobutylicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HDP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HDP FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.06&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2qh0|2qh0]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CAC2192, CA_C2192 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1488 "Clostridium acetobutyricum" Prevot 1940])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hdp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hdp OCA], [https://pdbe.org/3hdp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hdp RCSB], [https://www.ebi.ac.uk/pdbsum/3hdp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hdp ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lactoylglutathione_lyase Lactoylglutathione lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.5 4.4.1.5] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hdp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hdp OCA], [http://pdbe.org/3hdp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3hdp RCSB], [http://www.ebi.ac.uk/pdbsum/3hdp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3hdp ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q97H22_CLOAB Q97H22_CLOAB]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 22: Line 22:


==See Also==
==See Also==
*[[Glyoxalase|Glyoxalase]]
*[[Glyoxalase 3D structures|Glyoxalase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Clostridium acetobutyricum prevot 1940]]
[[Category: Clostridium acetobutylicum]]
[[Category: Lactoylglutathione lyase]]
[[Category: Large Structures]]
[[Category: Burley, S K]]
[[Category: Burley SK]]
[[Category: Eswaramoorthy, S]]
[[Category: Eswaramoorthy S]]
[[Category: Structural genomic]]
[[Category: Satyanarayana L]]
[[Category: Satyanarayana, L]]
[[Category: Swaminathan S]]
[[Category: Swaminathan, S]]
[[Category: Glutathione]]
[[Category: Glyoxalase]]
[[Category: Lyase]]
[[Category: Methylglyoxal]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
[[Category: PSI, Protein structure initiative]]

Latest revision as of 10:20, 6 September 2023

Crystal structure of the NI(II)-bound Glyoxalase-I from Clostridium acetobutylicumCrystal structure of the NI(II)-bound Glyoxalase-I from Clostridium acetobutylicum

Structural highlights

3hdp is a 1 chain structure with sequence from Clostridium acetobutylicum. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.06Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q97H22_CLOAB

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3hdp, resolution 2.06Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3hdp&oldid=3863926"