3g20: Difference between revisions

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 ==Crystal structure of the major pseudopilin from the type 2 secretion system of enterohaemorrhagic Escherichia coli==
-<StructureSection load='3g20' size='340' side='right' caption='[[3g20]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
+<StructureSection load='3g20' size='340' side='right'caption='[[3g20]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3g20]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_o157:h7 Escherichia coli o157:h7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G20 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3G20 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3g20]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_O157:H7 Escherichia coli O157:H7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G20 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G20 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ECO57PM05, etpG, GSPG, L7036 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83334 Escherichia coli O157:H7])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3g20 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g20 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3g20 RCSB], [http://www.ebi.ac.uk/pdbsum/3g20 PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g20 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g20 OCA], [https://pdbe.org/3g20 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g20 RCSB], [https://www.ebi.ac.uk/pdbsum/3g20 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g20 ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q7BSV8_ECO57 Q7BSV8_ECO57]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g2/3g20_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g2/3g20_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3g20 ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 25: / Line 28: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 3g20" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Pseudopilin|Pseudopilin]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Escherichia coli o157:h7]]
+[[Category: Escherichia coli O157:H7]]
-[[Category: Gray, M D]]
+[[Category: Large Structures]]
-[[Category: Hol, W G.J]]
+[[Category: Gray MD]]
-[[Category: Korotkov, K V]]
+[[Category: Hol WGJ]]
-[[Category: Kreger, A]]
+[[Category: Korotkov KV]]
-[[Category: Sandkvist, M]]
+[[Category: Kreger A]]
-[[Category: Turley, S]]
+[[Category: Sandkvist M]]
-[[Category: Complex]]
+[[Category: Turley S]]
-[[Category: General secretory pathway]]
-[[Category: Major pilin]]
-[[Category: Protein transport]]