3hsd: Difference between revisions

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-{{Seed}}
-[[Image:3hsd.png|left|200px]]
-<!--
+==Crystal structure of E. coli HPPK(Y53A)==
-The line below this paragraph, containing "STRUCTURE_3hsd", creates the "Structure Box" on the page.
+<StructureSection load='3hsd' size='340' side='right'caption='[[3hsd]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3hsd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HSD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HSD FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.652&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-{{STRUCTURE_3hsd|  PDB=3hsd  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hsd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hsd OCA], [https://pdbe.org/3hsd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hsd RCSB], [https://www.ebi.ac.uk/pdbsum/3hsd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hsd ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/HPPK_ECOLI HPPK_ECOLI]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hs/3hsd_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hsd ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of E. coli HPPK(Y53A)===
+==See Also==
+*[[HPPK 3D structures|HPPK 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-HSD is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HSD OCA].
+[[Category: Escherichia coli K-12]]
+[[Category: Large Structures]]
-==Reference==
+[[Category: Blaszczyk J]]
-<ref group="xtra">PMID:10378268</ref><references group="xtra"/>
+[[Category: Ji X]]
-[[Category: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase]]
+[[Category: Li Y]]
-[[Category: Escherichia coli]]
+[[Category: Yan H]]
-[[Category: Blaszczyk, J.]]
-[[Category: Ji, X.]]
-[[Category: Li, Y.]]
-[[Category: Yan, H.]]
-[[Category: Alpha beta]]
-[[Category: Atp-binding]]
-[[Category: Folate biosynthesis]]
-[[Category: Kinase]]
-[[Category: Nucleotide-binding]]
-[[Category: Transferase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul  7 08:13:15 2010''