3eev: Difference between revisions

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 ==Crystal Structure of Chloramphenicol Acetyltransferase VCA0300 from Vibrio cholerae O1 biovar eltor==
-<StructureSection load='3eev' size='340' side='right' caption='[[3eev]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
+<StructureSection load='3eev' size='340' side='right'caption='[[3eev]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3eev]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae_o1_biovar_el_tor Vibrio cholerae o1 biovar el tor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EEV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3EEV FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3eev]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EEV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EEV FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.61&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">catB9, VC_A0300 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=686 Vibrio cholerae O1 biovar El Tor])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3eev FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eev OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3eev RCSB], [http://www.ebi.ac.uk/pdbsum/3eev PDBsum], [http://www.topsan.org/Proteins/CSGID/3eev TOPSAN]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eev FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eev OCA], [https://pdbe.org/3eev PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eev RCSB], [https://www.ebi.ac.uk/pdbsum/3eev PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eev ProSAT], [https://www.topsan.org/Proteins/CSGID/3eev TOPSAN]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q9KMN1_VIBCH Q9KMN1_VIBCH]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ee/3eev_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ee/3eev_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3eev ConSurf].
 <div style="clear:both"></div>
 ==See Also==
-*[[Chloramphenicol acetyltransferase|Chloramphenicol acetyltransferase]]
+*[[Chloramphenicol acetyltransferase 3D structures|Chloramphenicol acetyltransferase 3D structures]]
 __TOC__
 </StructureSection>
-[[Category: Vibrio cholerae o1 biovar el tor]]
+[[Category: Large Structures]]
-[[Category: Anderson, W F]]
+[[Category: Vibrio cholerae O1 biovar El Tor str. N16961]]
-[[Category: Structural genomic]]
+[[Category: Anderson WF]]
-[[Category: Joachimiak, A]]
+[[Category: Joachimiak A]]
-[[Category: Kim, Y]]
+[[Category: Kim Y]]
-[[Category: Kwon, K]]
+[[Category: Kwon K]]
-[[Category: Maltseva, N]]
+[[Category: Maltseva N]]
-[[Category: Beta-helix]]
-[[Category: Csgid]]
-[[Category: Transferase]]