3dzd: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==Crystal structure of sigma54 activator NTRC4 in the inactive state==
-<StructureSection load='3dzd' size='340' side='right' caption='[[3dzd]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+<StructureSection load='3dzd' size='340' side='right'caption='[[3dzd]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3dzd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DZD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DZD FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3dzd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DZD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DZD FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3e7l|3e7l]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dzd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dzd OCA], [https://pdbe.org/3dzd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dzd RCSB], [https://www.ebi.ac.uk/pdbsum/3dzd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dzd ProSAT]</span></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aq_164, ntrC4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=63363 Aquifex aeolicus])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dzd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dzd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dzd RCSB], [http://www.ebi.ac.uk/pdbsum/3dzd PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/O66551_AQUAE O66551_AQUAE]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 17: / Line 18: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 3dzd" style="background-color:#fffaf0;"></div>
 == References ==
 <references/>
@@ Line 22: / Line 24: @@
 </StructureSection>
 [[Category: Aquifex aeolicus]]
-[[Category: Batchelor, J D]]
+[[Category: Large Structures]]
-[[Category: Carlo, S De]]
+[[Category: Batchelor JD]]
-[[Category: Doucleff, M]]
+[[Category: De Carlo S]]
-[[Category: Heideker, J]]
+[[Category: Doucleff M]]
-[[Category: Lamers, M M]]
+[[Category: Heideker J]]
-[[Category: Lee, C J]]
+[[Category: Lamers MM]]
-[[Category: Matsubara, K]]
+[[Category: Lee C-J]]
-[[Category: Pelton, J G]]
+[[Category: Matsubara K]]
-[[Category: Wemmer, D E]]
+[[Category: Pelton JG]]
-[[Category: Aaa+ atpase]]
+[[Category: Wemmer DE]]
-[[Category: Atp-binding]]
-[[Category: Nucleotide-binding]]
-[[Category: Response regulator]]
-[[Category: Sigma43 activator]]
-[[Category: Transcription]]
-[[Category: Transcription regulation]]
-[[Category: Transcription regulator]]
-[[Category: Transcriptional activator]]