3dr3: Difference between revisions

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==Structure of IDP00107, a potential N-acetyl-gamma-glutamylphosphate reductase from Shigella flexneri==
==Structure of IDP00107, a potential N-acetyl-gamma-glutamylphosphate reductase from Shigella flexneri==
<StructureSection load='3dr3' size='340' side='right' caption='[[3dr3]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='3dr3' size='340' side='right'caption='[[3dr3]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3dr3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"shigella_paradysenteriae"_weldin_1927 "shigella paradysenteriae" weldin 1927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DR3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DR3 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3dr3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DR3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DR3 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLT:D-MALATE'>MLT</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2g17|2g17]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLT:D-MALATE'>MLT</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">argC, SF4035, S3711 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 "Shigella paradysenteriae" Weldin 1927])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dr3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dr3 OCA], [https://pdbe.org/3dr3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dr3 RCSB], [https://www.ebi.ac.uk/pdbsum/3dr3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dr3 ProSAT], [https://www.topsan.org/Proteins/CSGID/3dr3 TOPSAN]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Oxidoreductase Oxidoreductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.38 1.2.1.38] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dr3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dr3 OCA], [http://pdbe.org/3dr3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dr3 RCSB], [http://www.ebi.ac.uk/pdbsum/3dr3 PDBsum], [http://www.topsan.org/Proteins/CSGID/3dr3 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/ARGC_SHIFL ARGC_SHIFL]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/3dr3_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/3dr3_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Shigella paradysenteriae weldin 1927]]
[[Category: Large Structures]]
[[Category: Oxidoreductase]]
[[Category: Anderson, W F]]
[[Category: Structural genomic]]
[[Category: Edwards, A M]]
[[Category: Onopriyenko, O]]
[[Category: Savchenko, A]]
[[Category: Singer, A U]]
[[Category: Skarina, T]]
[[Category: Amino-acid biosynthesis]]
[[Category: Argc]]
[[Category: Arginine biosynthesis]]
[[Category: Csgid target]]
[[Category: Essential gene]]
[[Category: Nadp]]
[[Category: Oxidoreductase. funded by the national institute of allergy and infectious diseases of nih contract number hhsn272200700058c]]
[[Category: Shigella flexneri]]
[[Category: Shigella flexneri]]
[[Category: Anderson WF]]
[[Category: Edwards AM]]
[[Category: Onopriyenko O]]
[[Category: Savchenko A]]
[[Category: Singer AU]]
[[Category: Skarina T]]

Latest revision as of 15:51, 30 August 2023

Structure of IDP00107, a potential N-acetyl-gamma-glutamylphosphate reductase from Shigella flexneriStructure of IDP00107, a potential N-acetyl-gamma-glutamylphosphate reductase from Shigella flexneri

Structural highlights

3dr3 is a 1 chain structure with sequence from Shigella flexneri. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

ARGC_SHIFL

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3dr3, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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