3dob: Difference between revisions

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{{Seed}}
[[Image:3dob.png|left|200px]]


<!--
==Peptide-binding domain of Heat shock 70 kDa protein F44E5.5 from C.elegans.==
The line below this paragraph, containing "STRUCTURE_3dob", creates the "Structure Box" on the page.
<StructureSection load='3dob' size='340' side='right'caption='[[3dob]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dob]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DOB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DOB FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.39&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene></td></tr>
{{STRUCTURE_3dob|  PDB=3dob |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dob FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dob OCA], [https://pdbe.org/3dob PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dob RCSB], [https://www.ebi.ac.uk/pdbsum/3dob PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dob ProSAT], [https://www.topsan.org/Proteins/MCSG/3dob TOPSAN]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/do/3dob_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dob ConSurf].
<div style="clear:both"></div>


===Peptide-binding domain of Heat shock 70 kDa protein F44E5.5 from C.elegans.===
==See Also==
 
*[[Heat Shock Protein structures|Heat Shock Protein structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3DOB is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DOB OCA].
[[Category: Caenorhabditis elegans]]
[[Category: Caenorhabditis elegans]]
[[Category: Gu, M.]]
[[Category: Large Structures]]
[[Category: Hatzos, C.]]
[[Category: Gu M]]
[[Category: Joachimiak, A.]]
[[Category: Hatzos C]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Joachimiak A]]
[[Category: Morimoto, R I.]]
[[Category: Morimoto RI]]
[[Category: Osipiuk, J.]]
[[Category: Osipiuk J]]
[[Category: Voisine, C.]]
[[Category: Voisine C]]
[[Category: Zhang, R.]]
[[Category: Zhang R]]
[[Category: Apc90015 11]]
[[Category: Atp-binding]]
[[Category: Hsp70]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Nucleotide-binding]]
[[Category: Peptide-binding domain]]
[[Category: Protein binding]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 10:05:52 2008''

Latest revision as of 15:50, 30 August 2023

Peptide-binding domain of Heat shock 70 kDa protein F44E5.5 from C.elegans.Peptide-binding domain of Heat shock 70 kDa protein F44E5.5 from C.elegans.

Structural highlights

3dob is a 2 chain structure with sequence from Caenorhabditis elegans. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.39Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3dob, resolution 2.39Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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