3db9: Difference between revisions

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[[Image:3db9.png|left|200px]]


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==Crystal structure of UPF0317 protein Atu3911 from Agrobacterium tumefaciens. NorthEast Strcutural Genomics target AtR186==
The line below this paragraph, containing "STRUCTURE_3db9", creates the "Structure Box" on the page.
<StructureSection load='3db9' size='340' side='right'caption='[[3db9]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3db9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DB9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DB9 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3db9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3db9 OCA], [https://pdbe.org/3db9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3db9 RCSB], [https://www.ebi.ac.uk/pdbsum/3db9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3db9 ProSAT], [https://www.topsan.org/Proteins/NESGC/3db9 TOPSAN]</span></td></tr>
{{STRUCTURE_3db9|  PDB=3db9  |  SCENE=  }}
</table>
 
== Function ==
===Crystal structure of UPF0317 protein Atu3911 from Agrobacterium tumefaciens. NorthEast Strcutural Genomics target AtR186===
[https://www.uniprot.org/uniprot/Y3911_AGRFC Y3911_AGRFC]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
3DB9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DB9 OCA].  
  <jmolCheckbox>
[[Category: Agrobacterium tumefaciens str. c58]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/3db9_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Abashidze, M.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Acton, T B.]]
  </jmolCheckbox>
[[Category: Baran, M C.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3db9 ConSurf].
[[Category: Hunt, J F.]]
<div style="clear:both"></div>
[[Category: Janjua, H.]]
__TOC__
[[Category: Liu, J.]]
</StructureSection>
[[Category: Montelione, G T.]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Large Structures]]
[[Category: Owens, L.]]
[[Category: Abashidze M]]
[[Category: Rost, B.]]
[[Category: Acton TB]]
[[Category: Seetharaman, J.]]
[[Category: Baran MC]]
[[Category: Tong, L.]]
[[Category: Hunt JF]]
[[Category: Wang, D.]]
[[Category: Janjua H]]
[[Category: Xiao, R.]]
[[Category: Liu J]]
[[Category: Agrobacterium tumefacien]]
[[Category: Montelione GT]]
[[Category: Belongs to the upf0317 family]]
[[Category: Owens L]]
[[Category: Nesg]]
[[Category: Rost B]]
[[Category: Northeast structural genomics consortium]]
[[Category: Seetharaman J]]
[[Category: Protein structure initiative]]
[[Category: Tong L]]
[[Category: Psi-2]]
[[Category: Wang D]]
[[Category: Structural genomic]]
[[Category: Xiao R]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 06:06:20 2008''

Latest revision as of 15:44, 30 August 2023

Crystal structure of UPF0317 protein Atu3911 from Agrobacterium tumefaciens. NorthEast Strcutural Genomics target AtR186Crystal structure of UPF0317 protein Atu3911 from Agrobacterium tumefaciens. NorthEast Strcutural Genomics target AtR186

Structural highlights

3db9 is a 1 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.8Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Y3911_AGRFC

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3db9, resolution 2.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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