3d0l: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==Crystal structure of the HIV-1 broadly neutralizing antibody 2F5 in complex with the gp41 FP-MPER Hyb3K construct 514GIGALFLGFLGAAGS528KK-Ahx-655KNEQELLELDKWASLWN671==
-<StructureSection load='3d0l' size='340' side='right' caption='[[3d0l]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
+<StructureSection load='3d0l' size='340' side='right'caption='[[3d0l]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3d0l]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3D0L FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3d0l]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D0L FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACA:6-AMINOHEXANOIC+ACID'>ACA</scene>, <scene name='pdbligand=YCM:S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE'>YCM</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACA:6-AMINOHEXANOIC+ACID'>ACA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=YCM:S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE'>YCM</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2pr4|2pr4]], [[2p8l|2p8l]], [[2p8m|2p8m]], [[2p8p|2p8p]], [[1tjh|1tjh]], [[3d0v|3d0v]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d0l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d0l OCA], [https://pdbe.org/3d0l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d0l RCSB], [https://www.ebi.ac.uk/pdbsum/3d0l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d0l ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d0l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d0l OCA], [http://pdbe.org/3d0l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3d0l RCSB], [http://www.ebi.ac.uk/pdbsum/3d0l PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3d0l ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q6GMX6_HUMAN Q6GMX6_HUMAN]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 33: / Line 34: @@
 </StructureSection>
 [[Category: Homo sapiens]]
-[[Category: Bryson, S]]
+[[Category: Large Structures]]
-[[Category: Julien, J P]]
+[[Category: Bryson S]]
-[[Category: Pai, E F]]
+[[Category: Julien JP]]
-[[Category: Antibody]]
+[[Category: Pai EF]]
-[[Category: Epitope]]
-[[Category: Gp41]]
-[[Category: Hiv]]
-[[Category: Immune system]]
-[[Category: Neutralization]]