3c6q: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(13 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3c6q.jpg|left|200px]]


{{Structure
==Apo and ligand-bound form of a thermophilic glucose/xylose binding protein==
|PDB= 3c6q |SIZE=350|CAPTION= <scene name='initialview01'>3c6q</scene>, resolution 2.30&Aring;
<StructureSection load='3c6q' size='340' side='right'caption='[[3c6q]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:Xyp+Binding+Site+For+Residue+C+500'>AC1</scene> and <scene name='pdbsite=AC2:Xyp+Binding+Site+For+Residue+D+501'>AC2</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene>
<table><tr><td colspan='2'>[[3c6q]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C6Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C6Q FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
|GENE= TM0114 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c6q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c6q OCA], [https://pdbe.org/3c6q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c6q RCSB], [https://www.ebi.ac.uk/pdbsum/3c6q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c6q ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9WXW9_THEMA Q9WXW9_THEMA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c6/3c6q_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c6q ConSurf].
<div style="clear:both"></div>


'''Apo and ligand-bound form of a thermophilic glucose/xylose binding protein'''
==See Also==
 
*[[ABC transporter 3D structures|ABC transporter 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3C6Q is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C6Q OCA].
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: Cuneo, M J.]]
[[Category: Cuneo MJ]]
[[Category: Hellinga, H W.]]
[[Category: Hellinga HW]]
[[Category: XYP]]
[[Category: glucose]]
[[Category: glucose binding protein]]
[[Category: periplasmic binding protein]]
[[Category: sugar binding protein]]
[[Category: xylose]]
[[Category: xylose binding protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 19:02:48 2008''

Latest revision as of 15:23, 30 August 2023

Apo and ligand-bound form of a thermophilic glucose/xylose binding proteinApo and ligand-bound form of a thermophilic glucose/xylose binding protein

Structural highlights

3c6q is a 4 chain structure with sequence from Thermotoga maritima. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.3Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q9WXW9_THEMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3c6q, resolution 2.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3c6q&oldid=3856711"