3bkp: Difference between revisions

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-{{Seed}}
-[[Image:3bkp.png|left|200px]]
-<!--
+==Crystal structure of the Toxoplasma gondii cyclophilin, 49.m03261==
-The line below this paragraph, containing "STRUCTURE_3bkp", creates the "Structure Box" on the page.
+<StructureSection load='3bkp' size='340' side='right'caption='[[3bkp]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3bkp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Toxoplasma_gondii Toxoplasma gondii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BKP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BKP FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-{{STRUCTURE_3bkp|  PDB=3bkp  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bkp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bkp OCA], [https://pdbe.org/3bkp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bkp RCSB], [https://www.ebi.ac.uk/pdbsum/3bkp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bkp ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/D0VWS4_TOXGO D0VWS4_TOXGO]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bk/3bkp_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bkp ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of the Toxoplasma gondii cyclophilin, 49.m03261===
+==See Also==
+*[[Cyclophilin 3D structures|Cyclophilin 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-BKP is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Toxoplasma_gondii Toxoplasma gondii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BKP OCA].
+[[Category: Large Structures]]
 [[Category: Toxoplasma gondii]]
-[[Category: Amani, M.]]
+[[Category: Amani M]]
-[[Category: Arrowsmith, C H.]]
+[[Category: Arrowsmith CH]]
-[[Category: Artz, J D.]]
+[[Category: Artz JD]]
-[[Category: Bochkarev, A.]]
+[[Category: Bochkarev A]]
-[[Category: Edwards, A M.]]
+[[Category: Edwards AM]]
-[[Category: Hui, R.]]
+[[Category: Hui R]]
-[[Category: Khuu, C.]]
+[[Category: Khuu C]]
-[[Category: Kozieradzki, I.]]
+[[Category: Kozieradzki I]]
-[[Category: Lew, J.]]
+[[Category: Lew J]]
-[[Category: Lin, Y H.]]
+[[Category: Lin YH]]
-[[Category: SGC, Structural Genomics Consortium.]]
+[[Category: Schapira M]]
-[[Category: Schapira, M.]]
+[[Category: Sun X]]
-[[Category: Sun, X.]]
+[[Category: Weigelt J]]
-[[Category: Weigelt, J.]]
+[[Category: Wernimont AK]]
-[[Category: Wernimont, A K.]]
+[[Category: Zhao Y]]
-[[Category: Zhao, Y.]]
-[[Category: Cyclophilin]]
-[[Category: Isomerase]]
-[[Category: Malaria]]
-[[Category: Sgc]]
-[[Category: Structural genomic]]
-[[Category: Structural genomics consortium]]
-[[Category: Toxoplasma]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 07:00:39 2009''