3bge: Difference between revisions

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-[[Image:3bge.jpg|left|200px]]<br /><applet load="3bge" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="3bge, resolution 1.850&Aring;" />
-'''Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae'''<br />
-==About this Structure==
+==Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae==
-BGE is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria] with <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BGE OCA].
+<StructureSection load='3bge' size='340' side='right'caption='[[3bge]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-[[Category: Bacteria]]
+== Structural highlights ==
-[[Category: Single protein]]
+<table><tr><td colspan='2'>[[3bge]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae_86-028NP Haemophilus influenzae 86-028NP]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BGE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BGE FirstGlance]. <br>
-[[Category: Adams, J.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-[[Category: Almo, S C.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-[[Category: Bonanno, J B.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bge FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bge OCA], [https://pdbe.org/3bge PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bge RCSB], [https://www.ebi.ac.uk/pdbsum/3bge PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bge ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3bge TOPSAN]</span></td></tr>
-[[Category: Burley, S K.]]
+</table>
-[[Category: Freeman, J.]]
+== Function ==
-[[Category: Gheyi, T.]]
+[https://www.uniprot.org/uniprot/Q4QL22_HAEI8 Q4QL22_HAEI8]
-[[Category: Koss, J.]]
+== Evolutionary Conservation ==
-[[Category: Maletic, M.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Meyer, A J.]]
+Check<jmol>
-[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+  <jmolCheckbox>
-[[Category: Patskovsky, Y.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bg/3bge_consurf.spt"</scriptWhenChecked>
-[[Category: Ramagopal, U A.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Sauder, J M.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Toro, R.]]
+  </jmolCheckbox>
-[[Category: SO4]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bge ConSurf].
-[[Category: atp-binding]]
+<div style="clear:both"></div>
-[[Category: helicase]]
+__TOC__
-[[Category: new york structural genomix research consortium]]
+</StructureSection>
-[[Category: nucleotide binding protein]]
+[[Category: Haemophilus influenzae 86-028NP]]
-[[Category: nucleotide-binding]]
+[[Category: Large Structures]]
-[[Category: nysgxrc]]
+[[Category: Adams J]]
-[[Category: predicted aaa+atpase c-terminal fragment]]
+[[Category: Almo SC]]
-[[Category: protein structure initiative]]
+[[Category: Bonanno JB]]
-[[Category: psi-2]]
+[[Category: Burley SK]]
-[[Category: structural genomics]]
+[[Category: Freeman J]]
+[[Category: Gheyi T]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 19:05:29 2008''
+[[Category: Koss J]]
+[[Category: Maletic M]]
+[[Category: Meyer AJ]]
+[[Category: Patskovsky Y]]
+[[Category: Ramagopal UA]]
+[[Category: Sauder JM]]
+[[Category: Toro R]]