3be4: Difference between revisions

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-[[Image:3be4.jpg|left|200px]]<br /><applet load="3be4" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="3be4, resolution 1.600&Aring;" />
-'''Crystal structure of Cryptosporidium parvum adenylate kinase cgd5_3360'''<br />
-==About this Structure==
+==Crystal structure of Cryptosporidium parvum adenylate kinase cgd5_3360==
-BE4 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Cryptosporidium_parvum_iowa_ii Cryptosporidium parvum iowa ii] with <scene name='pdbligand=MG:'>MG</scene>, <scene name='pdbligand=AP5:'>AP5</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BE4 OCA].
+<StructureSection load='3be4' size='340' side='right'caption='[[3be4]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-[[Category: Cryptosporidium parvum iowa ii]]
+== Structural highlights ==
-[[Category: Single protein]]
+<table><tr><td colspan='2'>[[3be4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cryptosporidium_parvum_Iowa_II Cryptosporidium parvum Iowa II]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BE4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BE4 FirstGlance]. <br>
-[[Category: Amani, M.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-[[Category: Arrowsmith, C H.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AP5:BIS(ADENOSINE)-5-PENTAPHOSPHATE'>AP5</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-[[Category: Artz, J D.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3be4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3be4 OCA], [https://pdbe.org/3be4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3be4 RCSB], [https://www.ebi.ac.uk/pdbsum/3be4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3be4 ProSAT]</span></td></tr>
-[[Category: Bochkarev, A.]]
+</table>
-[[Category: Edwards, A M.]]
+== Function ==
-[[Category: Hui, R.]]
+[https://www.uniprot.org/uniprot/Q5CRC5_CRYPI Q5CRC5_CRYPI]
-[[Category: Khuu, C.]]
+== Evolutionary Conservation ==
-[[Category: Kozieradzki, I.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Lew, J.]]
+Check<jmol>
-[[Category: Lin, Y H.]]
+  <jmolCheckbox>
-[[Category: SGC, Structural Genomics Consortium.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/3be4_consurf.spt"</scriptWhenChecked>
-[[Category: Schapira, M.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Sun, X.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Weigelt, J.]]
+  </jmolCheckbox>
-[[Category: Wernimont, A K.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3be4 ConSurf].
-[[Category: Zhao, Y.]]
+<div style="clear:both"></div>
-[[Category: AP5]]
-[[Category: GOL]]
-[[Category: MG]]
-[[Category: adenylate kinase]]
-[[Category: cryptosporidium parvum nonprotein kinase inhibitors]]
-[[Category: malaria]]
-[[Category: nucleotide-binding]]
-[[Category: sgc]]
-[[Category: structural genomics]]
-[[Category: structural genomics consortium]]
-[[Category: transferase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 19:05:05 2008''
+==See Also==
+*[[Adenylate kinase 3D structures|Adenylate kinase 3D structures]]
+__TOC__
+</StructureSection>
+[[Category: Cryptosporidium parvum Iowa II]]
+[[Category: Large Structures]]
+[[Category: Amani M]]
+[[Category: Arrowsmith CH]]
+[[Category: Artz JD]]
+[[Category: Bochkarev A]]
+[[Category: Edwards AM]]
+[[Category: Hui R]]
+[[Category: Khuu C]]
+[[Category: Kozieradzki I]]
+[[Category: Lew J]]
+[[Category: Lin YH]]
+[[Category: Schapira M]]
+[[Category: Sun X]]
+[[Category: Weigelt J]]
+[[Category: Wernimont AK]]
+[[Category: Zhao Y]]