2qga: Difference between revisions

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[[Image:2qga.gif|left|200px]]<br /><applet load="2qga" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2qga, resolution 2.01&Aring;" />
'''Plasmodium vivax adenylosuccinate lyase Pv003765 with AMP bound'''<br />


==About this Structure==
==Plasmodium vivax adenylosuccinate lyase Pv003765 with AMP bound==
2QGA is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax] with <scene name='pdbligand=CA:'>CA</scene>, <scene name='pdbligand=SO4:'>SO4</scene> and <scene name='pdbligand=AMP:'>AMP</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Adenylosuccinate_lyase Adenylosuccinate lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.2.2 4.3.2.2] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGA OCA].  
<StructureSection load='2qga' size='340' side='right'caption='[[2qga]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
[[Category: Adenylosuccinate lyase]]
== Structural highlights ==
<table><tr><td colspan='2'>[[2qga]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QGA FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.01&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qga FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qga OCA], [https://pdbe.org/2qga PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qga RCSB], [https://www.ebi.ac.uk/pdbsum/2qga PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qga ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A5KBL5_PLAVS A5KBL5_PLAVS]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qg/2qga_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qga ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[Adenylosuccinate lyase 3D structures|Adenylosuccinate lyase 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Plasmodium vivax]]
[[Category: Plasmodium vivax]]
[[Category: Single protein]]
[[Category: Altamentova S]]
[[Category: Altamentova, S.]]
[[Category: Arrowsmith CH]]
[[Category: Arrowsmith, C H.]]
[[Category: Bochkarev A]]
[[Category: Bochkarev, A.]]
[[Category: Edwards AE]]
[[Category: Edwards, A E.]]
[[Category: Hills T]]
[[Category: Hills, T.]]
[[Category: Hui R]]
[[Category: Hui, R.]]
[[Category: Kozieradzki I]]
[[Category: Kozieradzki, I.]]
[[Category: Lew J]]
[[Category: Lew, J.]]
[[Category: Lunin VV]]
[[Category: Lunin, V V.]]
[[Category: Sundstrom M]]
[[Category: SGC, Structural Genomics Consortium.]]
[[Category: Weigelt J]]
[[Category: Sundstrom, M.]]
[[Category: Wernimont AK]]
[[Category: Weigelt, J.]]
[[Category: Wernimont, A K.]]
[[Category: AMP]]
[[Category: CA]]
[[Category: SO4]]
[[Category: adenylosuccinate lyase]]
[[Category: malaria]]
[[Category: pv003765]]
[[Category: sgc]]
[[Category: structural genomics consortium]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:39:12 2008''

Latest revision as of 14:31, 30 August 2023

Plasmodium vivax adenylosuccinate lyase Pv003765 with AMP boundPlasmodium vivax adenylosuccinate lyase Pv003765 with AMP bound

Structural highlights

2qga is a 2 chain structure with sequence from Plasmodium vivax. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.01Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A5KBL5_PLAVS

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2qga, resolution 2.01Å

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