2pwz: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:2pwz.png|left|200px]]
-<!--
+==Crystal structure of the apo form of E.Coli malate dehydrogenase==
-The line below this paragraph, containing "STRUCTURE_2pwz", creates the "Structure Box" on the page.
+<StructureSection load='2pwz' size='340' side='right'caption='[[2pwz]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2pwz]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PWZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PWZ FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pwz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pwz OCA], [https://pdbe.org/2pwz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pwz RCSB], [https://www.ebi.ac.uk/pdbsum/2pwz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pwz ProSAT]</span></td></tr>
-{{STRUCTURE_2pwz|  PDB=2pwz  |  SCENE=  }}
+</table>
+== Function ==
-===Crystal structure of the apo form of E.Coli malate dehydrogenase===
+[https://www.uniprot.org/uniprot/MDH_ECOLI MDH_ECOLI] Catalyzes the reversible oxidation of malate to oxaloacetate.[HAMAP-Rule:MF_01516]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-==About this Structure==
+Check<jmol>
-[[2pwz]] is a 4 chain structure of [[Malate dehydrogenase]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k12 Escherichia coli k12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PWZ OCA].
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pw/2pwz_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pwz ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Malate dehydrogenase]]
+*[[Malate Dehydrogenase 3D structures|Malate Dehydrogenase 3D structures]]
-[[Category: Escherichia coli k12]]
+__TOC__
-[[Category: Malate dehydrogenase]]
+</StructureSection>
-[[Category: Clarke, T A.]]
+[[Category: Escherichia coli K-12]]
-[[Category: Hemmings, A M.]]
+[[Category: Large Structures]]
-[[Category: Richardson, D J.]]
+[[Category: Clarke TA]]
-[[Category: Soderberg, C A.G.]]
+[[Category: Hemmings AM]]
-[[Category: Apo form of e coli malate dehydrogenase in space group c2]]
+[[Category: Richardson DJ]]
-[[Category: Oxidoreductase]]
+[[Category: Soderberg CAG]]