2o16: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2o16.jpg|left|200px]]<br /><applet load="2o16" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2o16, resolution 1.900&Aring;" />
-'''Crystal structure of a putative acetoin utilization protein (AcuB) from Vibrio cholerae'''<br />
-==About this Structure==
+==Crystal structure of a putative acetoin utilization protein (AcuB) from Vibrio cholerae==
-O16 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae] with <scene name='pdbligand=PO4:'>PO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O16 OCA].
+<StructureSection load='2o16' size='340' side='right'caption='[[2o16]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-[[Category: Single protein]]
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2o16]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O16 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O16 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o16 OCA], [https://pdbe.org/2o16 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o16 RCSB], [https://www.ebi.ac.uk/pdbsum/2o16 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o16 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2o16 TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q9KTZ3_VIBCH Q9KTZ3_VIBCH]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o1/2o16_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o16 ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Vibrio cholerae]]
-[[Category: Almo, S.C.]]
+[[Category: Almo SC]]
-[[Category: Bain, K.T.]]
+[[Category: Bain KT]]
-[[Category: Bonanno, J.B.]]
+[[Category: Bonanno JB]]
-[[Category: Burley, S.K.]]
+[[Category: Burley SK]]
-[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
+[[Category: Patskovsky Y]]
-[[Category: Patskovsky, Y.]]
+[[Category: Powell A]]
-[[Category: Powell, A.]]
+[[Category: Rutter M]]
-[[Category: Rutter, M.]]
+[[Category: Sauder JM]]
-[[Category: Sauder, M.J.]]
+[[Category: Slocombe A]]
-[[Category: Slocombe, A.]]
-[[Category: PO4]]
-[[Category: new york structural genomix research consortium]]
-[[Category: nysgxrc]]
-[[Category: protein structure initiative]]
-[[Category: psi-2]]
-[[Category: structural genomics]]
-[[Category: unknown function]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 21:03:09 2008''