2o0x: Difference between revisions

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 ==Mycobacterium tuberculosis epsp synthase in complex with intermediate==
-<StructureSection load='2o0x' size='340' side='right' caption='[[2o0x]], [[Resolution|resolution]] 1.96&Aring;' scene=''>
+<StructureSection load='2o0x' size='340' side='right'caption='[[2o0x]], [[Resolution|resolution]] 1.96&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2o0x]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_tuberculosis"_(zopf_1883)_klein_1884 "bacillus tuberculosis" (zopf 1883) klein 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O0X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2O0X FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2o0x]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O0X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O0X FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SKP:5-(1-CARBOXY-1-PHOSPHONOOXY-ETHOXYL)-4-HYDROXY-3-PHOSPHONOOXY-CYCLOHEX-1-ENECARBOXYLIC+ACID'>SKP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.96&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2o0b|2o0b]], [[2o0d|2o0d]], [[2o0e|2o0e]], [[2bjb|2bjb]], [[2o0z|2o0z]], [[2o15|2o15]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SKP:5-(1-CARBOXY-1-PHOSPHONOOXY-ETHOXYL)-4-HYDROXY-3-PHOSPHONOOXY-CYCLOHEX-1-ENECARBOXYLIC+ACID'>SKP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aroA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 "Bacillus tuberculosis" (Zopf 1883) Klein 1884])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o0x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o0x OCA], [https://pdbe.org/2o0x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o0x RCSB], [https://www.ebi.ac.uk/pdbsum/2o0x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o0x ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-phosphoshikimate_1-carboxyvinyltransferase 3-phosphoshikimate 1-carboxyvinyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.19 2.5.1.19] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o0x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o0x OCA], [http://pdbe.org/2o0x PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2o0x RCSB], [http://www.ebi.ac.uk/pdbsum/2o0x PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/AROA_MYCTU AROA_MYCTU]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o0/2o0x_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o0/2o0x_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o0x ConSurf].
 <div style="clear:both"></div>
 ==See Also==
-*[[EPSP synthase|EPSP synthase]]
+*[[EPSP synthase 3D structures|EPSP synthase 3D structures]]
 __TOC__
 </StructureSection>
-[[Category: 3-phosphoshikimate 1-carboxyvinyltransferase]]
+[[Category: Large Structures]]
-[[Category: Bartunik, H D]]
+[[Category: Mycobacterium tuberculosis]]
-[[Category: Kachalova, G S]]
+[[Category: Bartunik HD]]
-[[Category: XMTB, Mycobacterium Tuberculosis Structural Proteomics Project]]
+[[Category: Kachalova GS]]
-[[Category: Epsp synthase]]
-[[Category: M tuberculosis]]
-[[Category: Mycobacterium tuberculosis structural proteomics project]]
-[[Category: Shikimate pathway]]
-[[Category: Structural genomic]]
-[[Category: Transferase]]
-[[Category: Xmtb]]