2i6f: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==Receiver domain from Myxococcus xanthus social motility protein FrzS==
-<StructureSection load='2i6f' size='340' side='right' caption='[[2i6f]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+<StructureSection load='2i6f' size='340' side='right'caption='[[2i6f]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2i6f]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_25232 Atcc 25232]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I6F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2I6F FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2i6f]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Myxococcus_xanthus Myxococcus xanthus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I6F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I6F FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2gkg|2gkg]], [[2nt3|2nt3]], [[2nt4|2nt4]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">frzS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=34 ATCC 25232])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i6f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i6f OCA], [https://pdbe.org/2i6f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i6f RCSB], [https://www.ebi.ac.uk/pdbsum/2i6f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i6f ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2i6f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i6f OCA], [http://pdbe.org/2i6f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2i6f RCSB], [http://www.ebi.ac.uk/pdbsum/2i6f PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/O68522_MYXXA O68522_MYXXA]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i6/2i6f_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i6/2i6f_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i6f ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 29: / Line 31: @@
 ==See Also==
-*[[Response regulator|Response regulator]]
+*[[Response regulator 3D structure|Response regulator 3D structure]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Atcc 25232]]
+[[Category: Large Structures]]
-[[Category: Alber, T]]
+[[Category: Myxococcus xanthus]]
-[[Category: Echols, N]]
+[[Category: Alber T]]
-[[Category: Fraser, J]]
+[[Category: Echols N]]
-[[Category: Merlie, J]]
+[[Category: Fraser J]]
-[[Category: Zusman, D]]
+[[Category: Merlie J]]
-[[Category: Receiver domain]]
+[[Category: Zusman D]]
-[[Category: Signaling]]
-[[Category: Signaling protein]]
-[[Category: Social motility]]
-[[Category: Two-component]]