2i58: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2i58.jpg|left|200px]]<br /><applet load="2i58" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2i58, resolution 2.800&Aring;" />
-'''Crystal Structure of RafE from Streptococcus pneumoniae complexed with raffinose'''<br />
-==About this Structure==
+==Crystal Structure of RafE from Streptococcus pneumoniae complexed with raffinose==
-I58 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae] with <scene name='pdbligand=CL:'>CL</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I58 OCA].
+<StructureSection load='2i58' size='340' side='right'caption='[[2i58]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-[[Category: Single protein]]
+== Structural highlights ==
-[[Category: Streptococcus pneumoniae]]
+<table><tr><td colspan='2'>[[2i58]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I58 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I58 FirstGlance]. <br>
-[[Category: Isaacs, N.W.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-[[Category: Mitchell, T.J.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene></td></tr>
-[[Category: Paterson, N.G.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i58 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i58 OCA], [https://pdbe.org/2i58 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i58 RCSB], [https://www.ebi.ac.uk/pdbsum/2i58 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i58 ProSAT]</span></td></tr>
-[[Category: Riboldi-Tunnicliffe, A.]]
+</table>
-[[Category: CL]]
+== Function ==
-[[Category: complex with raffinose]]
+[https://www.uniprot.org/uniprot/A0A0H2URJ7_STRPN A0A0H2URJ7_STRPN]
-[[Category: sugar binding protein]]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i5/2i58_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i58 ConSurf].
+<div style="clear:both"></div>
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 14:16:17 2008''
+==See Also==
+*[[ABC transporter 3D structures|ABC transporter 3D structures]]
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Streptococcus pneumoniae TIGR4]]
+[[Category: Isaacs NW]]
+[[Category: Mitchell TJ]]
+[[Category: Paterson NG]]
+[[Category: Riboldi-Tunnicliffe A]]