2gx6: Difference between revisions

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[[Image:2gx6.jpg|left|200px]]


{{Structure
==Rational stabilization of E. coli ribose binding protein==
|PDB= 2gx6 |SIZE=350|CAPTION= <scene name='initialview01'>2gx6</scene>, resolution 1.970&Aring;
<StructureSection load='2gx6' size='340' side='right'caption='[[2gx6]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=RIP:RIBOSE(PYRANOSE+FORM)'>RIP</scene>
<table><tr><td colspan='2'>[[2gx6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GX6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GX6 FirstGlance]. <br>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Monosaccharide-transporting_ATPase Monosaccharide-transporting ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.17 3.6.3.17] </span>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.97&#8491;</td></tr>
|GENE= rbsB, prlB, rbsP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=RIP:RIBOSE(PYRANOSE+FORM)'>RIP</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gx6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gx6 OCA], [https://pdbe.org/2gx6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gx6 RCSB], [https://www.ebi.ac.uk/pdbsum/2gx6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gx6 ProSAT]</span></td></tr>
|RELATEDENTRY=[[1urp|1URP]], [[2dri|2DRI]]
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gx6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gx6 OCA], [http://www.ebi.ac.uk/pdbsum/2gx6 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2gx6 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/RBSB_ECOLI RBSB_ECOLI] Involved in the high-affinity D-ribose membrane transport system and also serves as the primary chemoreceptor for chemotaxis.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gx/2gx6_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gx6 ConSurf].
<div style="clear:both"></div>


'''Rational stabilization of E. coli ribose binding protein'''
==See Also==
 
*[[Ribose-binding protein|Ribose-binding protein]]
 
__TOC__
==About this Structure==
</StructureSection>
2GX6 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GX6 OCA].
[[Category: Escherichia coli K-12]]
[[Category: Escherichia coli]]
[[Category: Large Structures]]
[[Category: Monosaccharide-transporting ATPase]]
[[Category: Cuneo MJ]]
[[Category: Single protein]]
[[Category: Hellinga HW]]
[[Category: Cuneo, M J.]]
[[Category: Hellinga, H W.]]
[[Category: periplasmic binding protein]]
[[Category: rational stabilization]]
[[Category: rbp]]
[[Category: ribose binding protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:22:47 2008''

Latest revision as of 12:48, 30 August 2023

Rational stabilization of E. coli ribose binding proteinRational stabilization of E. coli ribose binding protein

Structural highlights

2gx6 is a 1 chain structure with sequence from Escherichia coli K-12. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.97Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RBSB_ECOLI Involved in the high-affinity D-ribose membrane transport system and also serves as the primary chemoreceptor for chemotaxis.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2gx6, resolution 1.97Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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