2gl5: Difference between revisions

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-[[Image:2gl5.gif|left|200px]]
- {{Structure
+==Crystal Structure of Putative Dehydratase from Salmonella Thyphimurium==
-|PDB= 2gl5 |SIZE=350|CAPTION= <scene name='initialview01'>2gl5</scene>, resolution 1.60&Aring;
+<StructureSection load='2gl5' size='340' side='right'caption='[[2gl5]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
+<table><tr><td colspan='2'>[[2gl5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GL5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GL5 FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-|GENE= STM2273 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=602 Salmonella typhimurium])
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03316 MR_like], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4948 COG4948]</span>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gl5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gl5 OCA], [https://pdbe.org/2gl5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gl5 RCSB], [https://www.ebi.ac.uk/pdbsum/2gl5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gl5 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2gl5 TOPSAN]</span></td></tr>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gl5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gl5 OCA], [http://www.ebi.ac.uk/pdbsum/2gl5 PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2gl5 RCSB]</span>
+</table>
-}}
+== Function ==
+[https://www.uniprot.org/uniprot/Q8ZNH1_SALTY Q8ZNH1_SALTY]
-'''Crystal Structure of Putative Dehydratase from Salmonella Thyphimurium'''
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
-==About this Structure==
+  <jmolCheckbox>
-GL5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GL5 OCA].
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gl/2gl5_consurf.spt"</scriptWhenChecked>
-[[Category: Salmonella typhimurium]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Single protein]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Adams, J M.]]
+  </jmolCheckbox>
-[[Category: Almo, S C.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gl5 ConSurf].
-[[Category: Burley, S K.]]
+<div style="clear:both"></div>
-[[Category: Dickey, M.]]
+__TOC__
-[[Category: Gerlt, J.]]
+</StructureSection>
-[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+[[Category: Large Structures]]
-[[Category: Ozyurt, S.]]
+[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]]
-[[Category: Patskovsky, Y.]]
+[[Category: Adams JM]]
-[[Category: Sauder, J M.]]
+[[Category: Almo SC]]
-[[Category: Wasserman, S R.]]
+[[Category: Burley SK]]
-[[Category: dehydratase]]
+[[Category: Dickey M]]
-[[Category: new york structural genomix research consortium structural genomic]]
+[[Category: Gerlt J]]
-[[Category: nysgxrc]]
+[[Category: Ozyurt S]]
-[[Category: protein structure initiative]]
+[[Category: Patskovsky Y]]
-[[Category: psi]]
+[[Category: Sauder JM]]
-[[Category: structural genomic]]
+[[Category: Wasserman SR]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:26:51 2008''