2fol: Difference between revisions

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-{{Seed}}
-[[Image:2fol.png|left|200px]]
-<!--
+==Crystal structure of human RAB1A in complex with GDP==
-The line below this paragraph, containing "STRUCTURE_2fol", creates the "Structure Box" on the page.
+<StructureSection load='2fol' size='340' side='right'caption='[[2fol]], [[Resolution|resolution]] 2.63&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2fol]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FOL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FOL FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.631&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
-{{STRUCTURE_2fol|  PDB=2fol  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fol FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fol OCA], [https://pdbe.org/2fol PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fol RCSB], [https://www.ebi.ac.uk/pdbsum/2fol PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fol ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/RAB1A_HUMAN RAB1A_HUMAN] Probably required for transit of protein from the ER through Golgi compartment. Binds GTP and GDP and possesses intrinsic GTPase activity.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fo/2fol_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fol ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of human RAB1A in complex with GDP===
+==See Also==
+*[[Ras-related protein Rab 3D structures|Ras-related protein Rab 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-FOL is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FOL OCA].
-==Reference==
-<ref group="xtra">PMID:15608370</ref><references group="xtra"/>
 [[Category: Homo sapiens]]
-[[Category: Arrowsmith, C.]]
+[[Category: Large Structures]]
-[[Category: Bochkarev, A.]]
+[[Category: Arrowsmith C]]
-[[Category: Edwards, A.]]
+[[Category: Bochkarev A]]
-[[Category: Park, H.]]
+[[Category: Edwards A]]
-[[Category: SGC, Structural Genomics Consortium.]]
+[[Category: Park H]]
-[[Category: Shen, L.]]
+[[Category: Shen L]]
-[[Category: Shen, Y.]]
+[[Category: Shen Y]]
-[[Category: Sundstrom, M.]]
+[[Category: Sundstrom M]]
-[[Category: Tempel, W.]]
+[[Category: Tempel W]]
-[[Category: Wang, J.]]
+[[Category: Wang J]]
-[[Category: Weigelt, J.]]
+[[Category: Weigelt J]]
-[[Category: G-protein]]
-[[Category: Gtp analogue]]
-[[Category: Rab]]
-[[Category: Sgc]]
-[[Category: Struct ural genomics consortium]]
-[[Category: Structural genomic]]
-[[Category: Structural genomics consortium]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 01:52:19 2009''