2f9z: Difference between revisions

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New page: left|200px<br /><applet load="2f9z" size="450" color="white" frame="true" align="right" spinBox="true" caption="2f9z, resolution 2.4Å" /> '''Complex between the c...
 
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[[Image:2f9z.gif|left|200px]]<br /><applet load="2f9z" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2f9z, resolution 2.4&Aring;" />
'''Complex between the chemotaxis deamidase CheD and the chemotaxis phosphatase CheC from Thermotoga maritima'''<br />


==Overview==
==Complex between the chemotaxis deamidase CheD and the chemotaxis phosphatase CheC from Thermotoga maritima==
Signal transduction underlying bacterial chemotaxis involves excitatory, phosphorylation and feedback control through deamidation and methylation, of sensory receptors. The structure of a complex between the, signal-terminating phosphatase, CheC, and the receptor-modifying, deamidase, CheD, reveals how CheC mimics receptor substrates to inhibit, CheD and how CheD stimulates CheC phosphatase activity. CheD resembles, other cysteine deamidases from bacterial pathogens that inactivate host, Rho-GTPases. CheD not only deamidates receptor glutamine residues, contained within a conserved structural motif but also hydrolyzes, glutamyl-methyl-esters at select regulatory positions. Substituting Gln, into the receptor motif of CheC turns the inhibitor into a CheD substrate., Phospho-CheY, the intracellular signal and CheC target, stabilizes the, CheC:CheD complex and reduces availability of CheD. A point mutation that, dissociates CheC from CheD impairs chemotaxis in vivo. Thus, CheC, incorporates an element of an upstream receptor to influence both its own, effect on receptor output and that of its binding partner, CheD.
<StructureSection load='2f9z' size='340' side='right'caption='[[2f9z]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2f9z]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F9Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F9Z FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f9z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f9z OCA], [https://pdbe.org/2f9z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f9z RCSB], [https://www.ebi.ac.uk/pdbsum/2f9z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f9z ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CHEC_THEMA CHEC_THEMA] Involved in restoring normal CheY-P levels by dephosphorylating CheY-P. Inhibits CheD by incorporating in its fold a structural motif that mimics a CheD substrate recognition site to bait and inactivate it.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f9/2f9z_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f9z ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Signal transduction underlying bacterial chemotaxis involves excitatory phosphorylation and feedback control through deamidation and methylation of sensory receptors. The structure of a complex between the signal-terminating phosphatase, CheC, and the receptor-modifying deamidase, CheD, reveals how CheC mimics receptor substrates to inhibit CheD and how CheD stimulates CheC phosphatase activity. CheD resembles other cysteine deamidases from bacterial pathogens that inactivate host Rho-GTPases. CheD not only deamidates receptor glutamine residues contained within a conserved structural motif but also hydrolyzes glutamyl-methyl-esters at select regulatory positions. Substituting Gln into the receptor motif of CheC turns the inhibitor into a CheD substrate. Phospho-CheY, the intracellular signal and CheC target, stabilizes the CheC:CheD complex and reduces availability of CheD. A point mutation that dissociates CheC from CheD impairs chemotaxis in vivo. Thus, CheC incorporates an element of an upstream receptor to influence both its own effect on receptor output and that of its binding partner, CheD.


==About this Structure==
A receptor-modifying deamidase in complex with a signaling phosphatase reveals reciprocal regulation.,Chao X, Muff TJ, Park SY, Zhang S, Pollard AM, Ordal GW, Bilwes AM, Crane BR Cell. 2006 Feb 10;124(3):561-71. PMID:16469702<ref>PMID:16469702</ref>
2F9Z is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Thermotoga_maritima_msb8 Thermotoga maritima msb8]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2F9Z OCA].


==Reference==
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
A receptor-modifying deamidase in complex with a signaling phosphatase reveals reciprocal regulation., Chao X, Muff TJ, Park SY, Zhang S, Pollard AM, Ordal GW, Bilwes AM, Crane BR, Cell. 2006 Feb 10;124(3):561-71. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16469702 16469702]
</div>
[[Category: Protein complex]]
<div class="pdbe-citations 2f9z" style="background-color:#fffaf0;"></div>
[[Category: Thermotoga maritima msb8]]
[[Category: Bilwes, A.M.]]
[[Category: Chao, X.]]
[[Category: Crane, B.R.]]
[[Category: Park, S.Y]]
[[Category: aspartyl phosphatase]]
[[Category: bacterial chemotaxis]]
[[Category: protein complex]]
[[Category: receptor deamidase]]
[[Category: reciprocal regulation]]
[[Category: signal transduction]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 10:26:43 2007''
==See Also==
*[[Chemotaxis protein 3D structures|Chemotaxis protein 3D structures]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermotoga maritima MSB8]]
[[Category: Bilwes AM]]
[[Category: Chao X]]
[[Category: Crane BR]]
[[Category: Park SY]]

Latest revision as of 12:24, 30 August 2023

Complex between the chemotaxis deamidase CheD and the chemotaxis phosphatase CheC from Thermotoga maritimaComplex between the chemotaxis deamidase CheD and the chemotaxis phosphatase CheC from Thermotoga maritima

Structural highlights

2f9z is a 4 chain structure with sequence from Thermotoga maritima MSB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CHEC_THEMA Involved in restoring normal CheY-P levels by dephosphorylating CheY-P. Inhibits CheD by incorporating in its fold a structural motif that mimics a CheD substrate recognition site to bait and inactivate it.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

Signal transduction underlying bacterial chemotaxis involves excitatory phosphorylation and feedback control through deamidation and methylation of sensory receptors. The structure of a complex between the signal-terminating phosphatase, CheC, and the receptor-modifying deamidase, CheD, reveals how CheC mimics receptor substrates to inhibit CheD and how CheD stimulates CheC phosphatase activity. CheD resembles other cysteine deamidases from bacterial pathogens that inactivate host Rho-GTPases. CheD not only deamidates receptor glutamine residues contained within a conserved structural motif but also hydrolyzes glutamyl-methyl-esters at select regulatory positions. Substituting Gln into the receptor motif of CheC turns the inhibitor into a CheD substrate. Phospho-CheY, the intracellular signal and CheC target, stabilizes the CheC:CheD complex and reduces availability of CheD. A point mutation that dissociates CheC from CheD impairs chemotaxis in vivo. Thus, CheC incorporates an element of an upstream receptor to influence both its own effect on receptor output and that of its binding partner, CheD.

A receptor-modifying deamidase in complex with a signaling phosphatase reveals reciprocal regulation.,Chao X, Muff TJ, Park SY, Zhang S, Pollard AM, Ordal GW, Bilwes AM, Crane BR Cell. 2006 Feb 10;124(3):561-71. PMID:16469702[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Chao X, Muff TJ, Park SY, Zhang S, Pollard AM, Ordal GW, Bilwes AM, Crane BR. A receptor-modifying deamidase in complex with a signaling phosphatase reveals reciprocal regulation. Cell. 2006 Feb 10;124(3):561-71. PMID:16469702 doi:http://dx.doi.org/10.1016/j.cell.2005.11.046

2f9z, resolution 2.40Å

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