2f84: Difference between revisions

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-[[Image:2f84.gif|left|200px]]<br /><applet load="2f84" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2f84, resolution 2.100&Aring;" />
-'''Crystal Structure of an orotidine-5'-monophosphate decarboxylase homolog from P.falciparum'''<br />
-==About this Structure==
+==Crystal Structure of an orotidine-5'-monophosphate decarboxylase homolog from P.falciparum==
-F84 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum_3d7 Plasmodium falciparum 3d7] with <scene name='pdbligand=PO4:'>PO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Orotidine-5'-phosphate_decarboxylase Orotidine-5'-phosphate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F84 OCA].
+<StructureSection load='2f84' size='340' side='right'caption='[[2f84]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-[[Category: Orotidine-5'-phosphate decarboxylase]]
+== Structural highlights ==
-[[Category: Plasmodium falciparum 3d7]]
+<table><tr><td colspan='2'>[[2f84]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F84 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F84 FirstGlance]. <br>
-[[Category: Single protein]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-[[Category: Caruthers, J M.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-[[Category: Hol, W G.J.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f84 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f84 OCA], [https://pdbe.org/2f84 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f84 RCSB], [https://www.ebi.ac.uk/pdbsum/2f84 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f84 ProSAT]</span></td></tr>
-[[Category: Merritt, E A.]]
+</table>
-[[Category: Robein, M.]]
+== Function ==
-[[Category: SGPP, Structural Genomics of Pathogenic Protozoa Consortium.]]
+[https://www.uniprot.org/uniprot/Q8IJH3_PLAF7 Q8IJH3_PLAF7]
-[[Category: PO4]]
+== Evolutionary Conservation ==
-[[Category: decarboxylase]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: omp]]
+Check<jmol>
-[[Category: orotidine]]
+  <jmolCheckbox>
-[[Category: protein structure initiative]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f8/2f84_consurf.spt"</scriptWhenChecked>
-[[Category: psi]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: sgpp]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: structural genomics]]
+  </jmolCheckbox>
-[[Category: structural genomics of pathogenic protozoa consortium]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f84 ConSurf].
+<div style="clear:both"></div>
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:18:41 2008''
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Plasmodium falciparum 3D7]]
+[[Category: Caruthers JM]]
+[[Category: Hol WGJ]]
+[[Category: Merritt EA]]
+[[Category: Robein M]]