2f84: Difference between revisions

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New page: left|200px<br /><applet load="2f84" size="350" color="white" frame="true" align="right" spinBox="true" caption="2f84, resolution 2.100Å" /> '''Crystal Structure o...
 
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[[Image:2f84.gif|left|200px]]<br /><applet load="2f84" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2f84, resolution 2.100&Aring;" />
'''Crystal Structure of an orotidine-5'-monophosphate decarboxylase homolog from P.falciparum'''<br />


==About this Structure==
==Crystal Structure of an orotidine-5'-monophosphate decarboxylase homolog from P.falciparum==
2F84 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum_3d7 Plasmodium falciparum 3d7] with <scene name='pdbligand=PO4:'>PO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Orotidine-5'-phosphate_decarboxylase Orotidine-5'-phosphate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F84 OCA].
<StructureSection load='2f84' size='340' side='right'caption='[[2f84]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
[[Category: Orotidine-5'-phosphate decarboxylase]]
== Structural highlights ==
[[Category: Plasmodium falciparum 3d7]]
<table><tr><td colspan='2'>[[2f84]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F84 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F84 FirstGlance]. <br>
[[Category: Single protein]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
[[Category: Caruthers, J.M.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
[[Category: Hol, W.G.J.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f84 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f84 OCA], [https://pdbe.org/2f84 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f84 RCSB], [https://www.ebi.ac.uk/pdbsum/2f84 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f84 ProSAT]</span></td></tr>
[[Category: Merritt, E.A.]]
</table>
[[Category: Robein, M.]]
== Function ==
[[Category: SGPP, Structural.Genomics.of.Pathogenic.Protozoa.Consortium.]]
[https://www.uniprot.org/uniprot/Q8IJH3_PLAF7 Q8IJH3_PLAF7]  
[[Category: PO4]]
== Evolutionary Conservation ==
[[Category: decarboxylase]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: omp]]
Check<jmol>
[[Category: orotidine]]
  <jmolCheckbox>
[[Category: protein structure initiative]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f8/2f84_consurf.spt"</scriptWhenChecked>
[[Category: psi]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: sgpp]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: structural genomics]]
  </jmolCheckbox>
[[Category: structural genomics of pathogenic protozoa consortium]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f84 ConSurf].
 
<div style="clear:both"></div>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 19:29:54 2008''
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Plasmodium falciparum 3D7]]
[[Category: Caruthers JM]]
[[Category: Hol WGJ]]
[[Category: Merritt EA]]
[[Category: Robein M]]

Latest revision as of 12:22, 30 August 2023

Crystal Structure of an orotidine-5'-monophosphate decarboxylase homolog from P.falciparumCrystal Structure of an orotidine-5'-monophosphate decarboxylase homolog from P.falciparum

Structural highlights

2f84 is a 1 chain structure with sequence from Plasmodium falciparum 3D7. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q8IJH3_PLAF7

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2f84, resolution 2.10Å

Drag the structure with the mouse to rotate

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OCA
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