Photosystem II: Difference between revisions

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<StructureSection load='3a0b' size='400'  caption='Photosystem II, [[3a0b]]' scene='' >
<StructureSection load='3a0b' size='350'  caption='Photosystem II, [[3a0b]]' scene='' >


==Background==
==Background==
This structure of '''Photosystem II''' was crystallized from the cyanobacteria, ''Thermosynechococcus elongatus'', at 3.0Å <ref>PMID: 16355230</ref> and at 3.50 Å <ref>PMID: 14764885</ref>. PDB codes are [[2axt]] and [[1s5l]], respectively.  Cyanobacteria and plants both contain Photosystem II while photosynthetic bacteria contain the bacterial reaction center.  This photosynthetic protein complex is associated with a variety of functional ligands. It is a <scene name='Photosystem_II/Psii_dimer/1'>dimer</scene> composed mainly of alpha-helices.  Nineteen <scene name='Photosystem_II/Protein_only/1'>subunits</scene> are in each monomer, with multiple extrinsic subunits associated with the oxygen evolving complex missing from this crystallization.  Photosystem II is a membrane bound protein complex that in plants is associated with the thylakoid membrane of chloroplasts.  <scene name='Photosystem_II/Hydrophobic_polar/1'>Polar and hydrophobic</scene> regions correlate with membrane associated nature of the protein.  '''<span style="color:gray;background-color:black;font-weight:bold;">Hydrophobic</span>''' helices make up the transmembranal portion, while '''<FONT COLOR="#C031C7">polar</FONT>''' residues are concentrated externally on either side of the membrane.
This structure of '''Photosystem II''' was crystallized from the cyanobacteria, ''Thermosynechococcus elongatus'', at 3.0Å <ref>PMID: 16355230</ref> and at 3.50 Å <ref name="Archit">PMID: 14764885</ref>. PDB codes are [[2axt]] and [[1s5l]], respectively.  Cyanobacteria and plants both contain Photosystem II while photosynthetic bacteria contain the bacterial reaction center.  This photosynthetic protein complex is associated with a variety of functional ligands. It is a <scene name='Photosystem_II/Psii_dimer/1'>dimer</scene> composed mainly of alpha-helices.  Nineteen <scene name='Photosystem_II/Protein_only/1'>subunits</scene> are in each monomer, with multiple extrinsic subunits associated with the oxygen evolving complex missing from this crystallization.  Photosystem II is a membrane bound protein complex that in plants is associated with the thylakoid membrane of chloroplasts.  <scene name='Photosystem_II/Hydrophobic_polar/1'>Polar and hydrophobic</scene> regions correlate with membrane associated nature of the protein.  '''<span style="color:gray;background-color:black;font-weight:bold;">Hydrophobic</span>''' helices make up the transmembranal portion, while '''<FONT COLOR="#C031C7">polar</FONT>''' residues are concentrated externally on either side of the membrane.


==Photosynthesis==
==Photosynthesis==
Photosystem II is an integral part of photosynthesis, the conversion of light energy into chemical energy by living organisms.  Photosystem II is linked to a variety of other proteins, including Photosytem I.  These proteins ultimately produce NADPH and ATP that power the Calvin cycle.  Using this energy, glucose is synthesized from carbon dioxide and water.  See also [[Photosynthesis]].
Photosystem II is an integral part of photosynthesis, the conversion of light energy into chemical energy by living organisms.  Photosystem II is linked to a variety of other proteins, including Photosytem I.  These proteins ultimately produce NADPH and ATP that power the [[Calvin cycle]].  Using this energy, glucose is synthesized from carbon dioxide and water.  See also [[Photosynthesis]].


==Electron Transfer==
==Electron Transfer==
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{{Clear}}
{{Clear}}
==Oxygen Evolution==
==Oxygen Evolution==
Another important facet of Photosystem II is its ability to oxidize water to oxygen with its <scene name='Photosystem_II/Oxygen_evolving_centers/11'>oxygen evolving centers</scene>.  These centers are <scene name='Photosystem_II/Single_oxygen_evolving/1'>cubane-like</scene> structures with 3 '''<FONT COLOR="#8D38C9">manganese</FONT>''', 4 '''<FONT COLOR="#C11B17">oxygen</FONT>''' and a '''<span style="color:lime;background-color:black;font-weight:bold;">calcium</span>''' linked to a fourth manganese<ref>PMID: 14764885</ref>.  Oxidation of water leaves 2 H <sup>+</sup> on the lumenal side of the membrane, helping to establish the proton gradient essential for ATP synthesis in the CF<sub>1</sub>CF<sub>0</sub>-ATP sythase protein.
Another important facet of Photosystem II is its ability to oxidize water to oxygen with its <scene name='Photosystem_II/Oxygen_evolving_centers/11'>oxygen evolving centers</scene>.  These centers are <scene name='Photosystem_II/Single_oxygen_evolving/1'>cubane-like</scene> structures with 3 '''<FONT COLOR="#8D38C9">manganese</FONT>''', 4 '''<FONT COLOR="#C11B17">oxygen</FONT>''' and a '''<span style="color:lime;background-color:black;font-weight:bold;">calcium</span>''' linked to a fourth manganese<ref name="Archit" />.  Oxidation of water leaves 2 H <sup>+</sup> on the lumenal side of the membrane, helping to establish the proton gradient essential for ATP synthesis in the CF<sub>1</sub>CF<sub>0</sub>-ATP sythase protein.


[[Image:b-car.svg.png|b-car.svg.png|thumb|left|400px|structure of beta carotene]]   
[[Image:b-car.svg.png|b-car.svg.png|thumb|left|400px|structure of beta carotene]]   
[[Image:plastoquinone.jpg|thumb|300px|left|reduced plastoquinone]]
[[Image:plastoquinone.jpg|thumb|300px|left|reduced plastoquinone]]
</StructureSection>
==3D structures of photosystem II==
==3D structures of photosystem II==


Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
[[Photosystem II 3D structures]]


[[3arc]], [[3a0b]], [[3a0h]], [[4il6]], [[3wu2]], [[4ub6]], [[4ub8]] – PSII – ''Thermosynechococcus vulcanos''<br />
</StructureSection>
[[3prq]], [[3prr]] - TePSII + terbutryn – ''Thermosynechococcus elongatus''<br />
[[3kzi]], [[3bz1]], [[3bz2]], [[2axt]], [[1w5c]], [[1s5l]], [[1izl]], [[1ilx]], [[1fe1]], [[4fby]], [[4ixr]], [[4ixq]], [[4pbu]], [[4pj0]], [[4q54]], [[4tnh]], [[4tni]], [[4tnj]], [[4tnk]] – TePSII<br />
[[3zpn]] - TePSII PSB28 protein<br />
[[4k7b]] - PSII extrinsic protein – ''Chaetoceros gracilis''<br />
[[2y6x]] – TePSII PSB27 protein<br />
[[2kvo]] – SyPSII reaction center PSB28 protein – Synechocystis – NMR<br />
[[2kmf]], [[2knd]] - SyPSII reaction center PSB27 subunit – NMR<br />
[[2vu4]], [[1vyk]], [[4rti]] – spPSII PSBP subunit – spinach<br />
[[1nze]] - spPSII PSBQ subunit<br />
[[1v2b]] - PSII PSBP subunit – tobacco<br />
[[4rth]] - PSII PSBP subunit – maize<br />
[[1fc6]], [[1fc7]], [[1fc9]], [[1fcf]] – PSII C terminal processing protease – ''Scenedesmus obliquus''


==Additional Resources==
==Additional Resources==

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Emily Forschler, Eran Hodis, Jaime Prilusky, Ilan Samish, David Canner, Eric Martz, Karl Oberholser, Michal Harel, Alexander Berchansky, Joel L. Sussman