2b31: Difference between revisions

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-[[Image:2b31.gif|left|200px]]
- {{Structure
+==Crystal structure of the complex formed between goat signalling protein with pentasaccharide at 3.1 A resolution reveals large scale conformational changes in the residues of TIM barrel==
-|PDB= 2b31 |SIZE=350|CAPTION= <scene name='initialview01'>2b31</scene>, resolution 3.10&Aring;
+<StructureSection load='2b31' size='340' side='right'caption='[[2b31]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>
+<table><tr><td colspan='2'>[[2b31]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1zu9 1zu9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B31 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2B31 FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
-|GENE=
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene></td></tr>
-|DOMAIN=
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2b31 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b31 OCA], [https://pdbe.org/2b31 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2b31 RCSB], [https://www.ebi.ac.uk/pdbsum/2b31 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2b31 ProSAT]</span></td></tr>
-|RELATEDENTRY=[[1qzo|1qzo]], [[1syt|1syt]], [[1zbv|1zbv]], [[2b2p|2B2P]], [[2b2z|2B2Z]]
+</table>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2b31 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b31 OCA], [http://www.ebi.ac.uk/pdbsum/2b31 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2b31 RCSB]</span>
+== Function ==
-}}
+[https://www.uniprot.org/uniprot/CH3L1_CAPHI CH3L1_CAPHI] Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b3/2b31_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2b31 ConSurf].
+<div style="clear:both"></div>
-'''Crystal structure of the complex formed between goat signalling protein with pentasaccharide at 3.1 A resolution reveals large scale conformational changes in the residues of TIM barrel'''
+==See Also==
+*[[Chitinase-3-like protein 3D structures|Chitinase-3-like protein 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-B31 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. This structure supersedes the now removed PDB entry 1ZU9. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B31 OCA].
 [[Category: Capra hircus]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Bhushan, A.]]
+[[Category: Bhushan A]]
-[[Category: Ethayathulla, A S.]]
+[[Category: Ethayathulla AS]]
-[[Category: Kumar, J.]]
+[[Category: Kumar J]]
-[[Category: Sharma, S.]]
+[[Category: Sharma S]]
-[[Category: Singh, N.]]
+[[Category: Singh N]]
-[[Category: Singh, T P.]]
+[[Category: Singh TP]]
-[[Category: Srivastava, D B.]]
+[[Category: Srivastava DB]]
-[[Category: complex pentasaccharide]]
-[[Category: crystal structure]]
-[[Category: signalling protein]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:00:47 2008''