2b31: Difference between revisions

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[[Image:2b31.png|left|200px]]


{{STRUCTURE_2b31|  PDB=2b31  |  SCENE=  }}
==Crystal structure of the complex formed between goat signalling protein with pentasaccharide at 3.1 A resolution reveals large scale conformational changes in the residues of TIM barrel==
 
<StructureSection load='2b31' size='340' side='right'caption='[[2b31]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
===Crystal structure of the complex formed between goat signalling protein with pentasaccharide at 3.1 A resolution reveals large scale conformational changes in the residues of TIM barrel===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2b31]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1zu9 1zu9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B31 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2B31 FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene></td></tr>
[[2b31]] is a 1 chain structure of [[Chitinase-3-like protein 1]] with sequence from [http://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1zu9 1zu9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B31 OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2b31 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b31 OCA], [https://pdbe.org/2b31 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2b31 RCSB], [https://www.ebi.ac.uk/pdbsum/2b31 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2b31 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CH3L1_CAPHI CH3L1_CAPHI] Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b3/2b31_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2b31 ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Chitinase-3-like protein 1|Chitinase-3-like protein 1]]
*[[Chitinase-3-like protein 3D structures|Chitinase-3-like protein 3D structures]]
__TOC__
</StructureSection>
[[Category: Capra hircus]]
[[Category: Capra hircus]]
[[Category: Bhushan, A.]]
[[Category: Large Structures]]
[[Category: Ethayathulla, A S.]]
[[Category: Bhushan A]]
[[Category: Kumar, J.]]
[[Category: Ethayathulla AS]]
[[Category: Sharma, S.]]
[[Category: Kumar J]]
[[Category: Singh, N.]]
[[Category: Sharma S]]
[[Category: Singh, T P.]]
[[Category: Singh N]]
[[Category: Srivastava, D B.]]
[[Category: Singh TP]]
[[Category: Complex pentasaccharide]]
[[Category: Srivastava DB]]
[[Category: Signaling protein]]
[[Category: Signalling protein]]

Latest revision as of 10:33, 23 August 2023

Crystal structure of the complex formed between goat signalling protein with pentasaccharide at 3.1 A resolution reveals large scale conformational changes in the residues of TIM barrelCrystal structure of the complex formed between goat signalling protein with pentasaccharide at 3.1 A resolution reveals large scale conformational changes in the residues of TIM barrel

Structural highlights

2b31 is a 1 chain structure with sequence from Capra hircus. This structure supersedes the now removed PDB entry 1zu9. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.1Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CH3L1_CAPHI Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2b31, resolution 3.10Å

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