2as5: Difference between revisions

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-{{Seed}}
-[[Image:2as5.png|left|200px]]
-<!--
+==Structure of the DNA binding domains of NFAT and FOXP2 bound specifically to DNA.==
-The line below this paragraph, containing "STRUCTURE_2as5", creates the "Structure Box" on the page.
+<StructureSection load='2as5' size='340' side='right'caption='[[2as5]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2as5]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AS5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AS5 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-{{STRUCTURE_2as5|  PDB=2as5  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2as5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2as5 OCA], [https://pdbe.org/2as5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2as5 RCSB], [https://www.ebi.ac.uk/pdbsum/2as5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2as5 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/NFAC2_HUMAN NFAC2_HUMAN] Plays a role in the inducible expression of cytokine genes in T-cells, especially in the induction of the IL-2, IL-3, IL-4, TNF-alpha or GM-CSF. Promotes invasive migration through the activation of GPC6 expression and WNT5A signaling pathway.<ref>PMID:21871017</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/as/2as5_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2as5 ConSurf].
+<div style="clear:both"></div>
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+Antigen stimulation of immune cells activates the transcription factor NFAT, a key regulator of T cell activation and anergy. NFAT forms cooperative complexes with the AP-1 family of transcription factors and regulates T cell activation-associated genes. Here we show that regulatory T cell (Treg) function is mediated by an analogous cooperative complex of NFAT with the forkhead transcription factor FOXP3, a lineage specification factor for Tregs. The crystal structure of an NFAT:FOXP2:DNA complex reveals an extensive protein-protein interaction interface between NFAT and FOXP2. Structure-guided mutations of FOXP3, predicted to progressively disrupt its interaction with NFAT, interfere in a graded manner with the ability of FOXP3 to repress expression of the cytokine IL2, upregulate expression of the Treg markers CTLA4 and CD25, and confer suppressor function in a murine model of autoimmune diabetes. Thus by switching transcriptional partners, NFAT converts the acute T cell activation program into the suppressor program of Tregs.
-===Structure of the DNA binding domains of NFAT and FOXP2 bound specifically to DNA.===
+FOXP3 controls regulatory T cell function through cooperation with NFAT.,Wu Y, Borde M, Heissmeyer V, Feuerer M, Lapan AD, Stroud JC, Bates DL, Guo L, Han A, Ziegler SF, Mathis D, Benoist C, Chen L, Rao A Cell. 2006 Jul 28;126(2):375-87. PMID:16873067<ref>PMID:16873067</ref>
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+</div>
+<div class="pdbe-citations 2as5" style="background-color:#fffaf0;"></div>
-<!--
+==See Also==
-The line below this paragraph, {{ABSTRACT_PUBMED_16873067}}, adds the Publication Abstract to the page
+*[[FOX 3D structures|FOX 3D structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 16873067 is the PubMed ID number.
+== References ==
--->
+<references/>
-{{ABSTRACT_PUBMED_16873067}}
+__TOC__
+</StructureSection>
-==Disease==
-Known disease associated with this structure: Speech-language disorder-1 OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=605317 605317]]
-==About this Structure==
-AS5 is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AS5 OCA].
-==Reference==
-FOXP3 controls regulatory T cell function through cooperation with NFAT., Wu Y, Borde M, Heissmeyer V, Feuerer M, Lapan AD, Stroud JC, Bates DL, Guo L, Han A, Ziegler SF, Mathis D, Benoist C, Chen L, Rao A, Cell. 2006 Jul 28;126(2):375-87. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16873067 16873067]
 [[Category: Homo sapiens]]
-[[Category: Protein complex]]
+[[Category: Large Structures]]
-[[Category: Bates, D L.]]
+[[Category: Bates DL]]
-[[Category: Borde, M.]]
+[[Category: Borde M]]
-[[Category: Chen, L.]]
+[[Category: Chen L]]
-[[Category: Guo, L.]]
+[[Category: Guo L]]
-[[Category: Han, A.]]
+[[Category: Han A]]
-[[Category: Rao, A.]]
+[[Category: Rao A]]
-[[Category: Stroud, J C.]]
+[[Category: Stroud JC]]
-[[Category: Wu, Y.]]
+[[Category: Wu Y]]
-[[Category: B-dna]]
-[[Category: Forkhead domain]]
-[[Category: Ig fold]]
-[[Category: Rel homology region]]
-[[Category: Rhr domain]]
-[[Category: Winged helix-turn-helix]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 04:47:58 2008''