1zvc: Difference between revisions

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New page: left|200px<br /><applet load="1zvc" size="450" color="white" frame="true" align="right" spinBox="true" caption="1zvc, resolution 1.79Å" /> '''X-ray structure of a...
 
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[[Image:1zvc.gif|left|200px]]<br /><applet load="1zvc" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1zvc, resolution 1.79&Aring;" />
'''X-ray structure of allene oxide cyclase from arabidopsis thaliana AT3G25760'''<br />


==About this Structure==
==X-ray structure of allene oxide cyclase from arabidopsis thaliana AT3G25760==
1ZVC is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana] with MG as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Allene-oxide_cyclase Allene-oxide cyclase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.99.6 5.3.99.6] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1ZVC OCA].  
<StructureSection load='1zvc' size='340' side='right'caption='[[1zvc]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
[[Category: Allene-oxide cyclase]]
== Structural highlights ==
<table><tr><td colspan='2'>[[1zvc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZVC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZVC FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zvc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zvc OCA], [https://pdbe.org/1zvc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zvc RCSB], [https://www.ebi.ac.uk/pdbsum/1zvc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zvc ProSAT], [https://www.topsan.org/Proteins/CESG/1zvc TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/AOC1_ARATH AOC1_ARATH] Involved in the production of 12-oxo-phytodienoic acid (OPDA), a precursor of jasmonic acid.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zv/1zvc_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zvc ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Allard, S.T.M.]]
[[Category: Allard STM]]
[[Category: Bingman, C.A.]]
[[Category: Bingman CA]]
[[Category: Bitto, E.]]
[[Category: Bitto E]]
[[Category: CESG, Center.for.Eukaryotic.Structural.Genomics.]]
[[Category: Han BW]]
[[Category: Han, B.W.]]
[[Category: Phillips Jr GN]]
[[Category: Jr., G.N.Phillips.]]
[[Category: Wesenberg GE]]
[[Category: Wesenberg, G.E.]]
[[Category: MG]]
[[Category: at3g25760]]
[[Category: center for eukaryotic structural genomics]]
[[Category: cesg]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomics]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 07:41:04 2007''

Latest revision as of 10:15, 23 August 2023

X-ray structure of allene oxide cyclase from arabidopsis thaliana AT3G25760X-ray structure of allene oxide cyclase from arabidopsis thaliana AT3G25760

Structural highlights

1zvc is a 1 chain structure with sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.79Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

AOC1_ARATH Involved in the production of 12-oxo-phytodienoic acid (OPDA), a precursor of jasmonic acid.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1zvc, resolution 1.79Å

Drag the structure with the mouse to rotate

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OCA
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