1xi9: Difference between revisions

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New page: left|200px<br /><applet load="1xi9" size="450" color="white" frame="true" align="right" spinBox="true" caption="1xi9, resolution 2.33Å" /> '''Alanine aminotransfe...
 
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[[Image:1xi9.jpg|left|200px]]<br /><applet load="1xi9" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1xi9, resolution 2.33&Aring;" />
'''Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001'''<br />


==About this Structure==
==Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001==
1XI9 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus_dsm_3638 Pyrococcus furiosus dsm 3638] with PLP as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1XI9 OCA].  
<StructureSection load='1xi9' size='340' side='right'caption='[[1xi9]], [[Resolution|resolution]] 2.33&Aring;' scene=''>
[[Category: Pyrococcus furiosus dsm 3638]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[1xi9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XI9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XI9 FirstGlance]. <br>
[[Category: Adams, M.W.W.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.33&#8491;</td></tr>
[[Category: Brereton, P.S.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
[[Category: Chang, S.H.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xi9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xi9 OCA], [https://pdbe.org/1xi9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xi9 RCSB], [https://www.ebi.ac.uk/pdbsum/1xi9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xi9 ProSAT], [https://www.topsan.org/Proteins/SECSG/1xi9 TOPSAN]</span></td></tr>
[[Category: Chen, L.]]
</table>
[[Category: II, F.L.Poole.]]
== Function ==
[[Category: III, W.B.Arendall.]]
[https://www.uniprot.org/uniprot/Q9P9M8_9EURY Q9P9M8_9EURY]  
[[Category: Izumi, M.]]
== Evolutionary Conservation ==
[[Category: Jr., F.E.Jenney.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Lee, D.]]
Check<jmol>
[[Category: Lee, H.S.]]
  <jmolCheckbox>
[[Category: Lin, D.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xi/1xi9_consurf.spt"</scriptWhenChecked>
[[Category: Liu, Z.J.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Richardson, D.C.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Richardson, J.S.]]
  </jmolCheckbox>
[[Category: Rose, J.P.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xi9 ConSurf].
[[Category: SECSG, Southeast.Collaboratory.for.Structural.Genomics.]]
<div style="clear:both"></div>
[[Category: Shah, A.]]
__TOC__
[[Category: Shah, C.]]
</StructureSection>
[[Category: Sugar, F.J.]]
[[Category: Large Structures]]
[[Category: Tempel, W.]]
[[Category: Pyrococcus furiosus DSM 3638]]
[[Category: Wang, B.C.]]
[[Category: Adams MWW]]
[[Category: Zhou, W.]]
[[Category: Arendall III WB]]
[[Category: PLP]]
[[Category: Brereton PS]]
[[Category: alanine aminotransferase]]
[[Category: Chang S-H]]
[[Category: hyperthermophile]]
[[Category: Chen L]]
[[Category: protein structure initiative]]
[[Category: Izumi M]]
[[Category: psi]]
[[Category: Jenney Jr FE]]
[[Category: pyrococcus furiosus]]
[[Category: Lee D]]
[[Category: secsg]]
[[Category: Lee H-S]]
[[Category: southeast collaboratory for structural genomics]]
[[Category: Lin D]]
 
[[Category: Liu Z-J]]
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 02:12:42 2007''
[[Category: Poole II FL]]
[[Category: Richardson DC]]
[[Category: Richardson JS]]
[[Category: Rose JP]]
[[Category: Shah A]]
[[Category: Shah C]]
[[Category: Sugar FJ]]
[[Category: Tempel W]]
[[Category: Wang B-C]]
[[Category: Zhou W]]

Latest revision as of 09:45, 23 August 2023

Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001

Structural highlights

1xi9 is a 4 chain structure with sequence from Pyrococcus furiosus DSM 3638. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.33Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9P9M8_9EURY

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1xi9, resolution 2.33Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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