1x9j: Difference between revisions

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OCA

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-{{Seed}}
-[[Image:1x9j.png|left|200px]]
-<!--
+==Structure of butyrate kinase 2 reveals both open- and citrate-induced closed conformations: implications for substrate-induced fit conformational changes==
-The line below this paragraph, containing "STRUCTURE_1x9j", creates the "Structure Box" on the page.
+<StructureSection load='1x9j' size='340' side='right'caption='[[1x9j]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1x9j]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X9J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X9J FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-{{STRUCTURE_1x9j|  PDB=1x9j  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x9j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x9j OCA], [https://pdbe.org/1x9j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x9j RCSB], [https://www.ebi.ac.uk/pdbsum/1x9j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x9j ProSAT]</span></td></tr>
+</table>
-===Structure of butyrate kinase 2 reveals both open- and citrate-induced closed conformations: implications for substrate-induced fit conformational changes===
+== Function ==
+[https://www.uniprot.org/uniprot/BUK2_THEMA BUK2_THEMA]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-X9J is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X9J OCA].
+Check<jmol>
-[[Category: Butyrate kinase]]
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x9/1x9j_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x9j ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Thermotoga maritima]]
-[[Category: Diao, J S.]]
+[[Category: Diao JS]]
-[[Category: Hasson, M S.]]
+[[Category: Hasson MS]]
-[[Category: Sanders, D A.]]
+[[Category: Sanders DA]]
-[[Category: Acetate kinase]]
-[[Category: Butyrate]]
-[[Category: Butyrate kinase]]
-[[Category: Enzyme mechanism]]
-[[Category: Hsc70]]
-[[Category: Isobutyrate]]
-[[Category: Isobutyrate kinase]]
-[[Category: Two similar domain]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 01:18:53 2009''