1x9j: Difference between revisions

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New page: left|200px<br /><applet load="1x9j" size="450" color="white" frame="true" align="right" spinBox="true" caption="1x9j, resolution 3.00Å" /> '''Structure of butyrat...
 
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[[Image:1x9j.gif|left|200px]]<br /><applet load="1x9j" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1x9j, resolution 3.00&Aring;" />
'''Structure of butyrate kinase 2 reveals both open- and citrate-induced closed conformations: implications for substrate-induced fit conformational changes'''<br />


==About this Structure==
==Structure of butyrate kinase 2 reveals both open- and citrate-induced closed conformations: implications for substrate-induced fit conformational changes==
1X9J is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima] with NA, PO4, CIT and GOL as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Butyrate_kinase Butyrate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.7 2.7.2.7] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1X9J OCA].  
<StructureSection load='1x9j' size='340' side='right'caption='[[1x9j]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
[[Category: Butyrate kinase]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[1x9j]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X9J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X9J FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x9j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x9j OCA], [https://pdbe.org/1x9j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x9j RCSB], [https://www.ebi.ac.uk/pdbsum/1x9j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x9j ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/BUK2_THEMA BUK2_THEMA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x9/1x9j_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x9j ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: Diao, J.S.]]
[[Category: Diao JS]]
[[Category: Hasson, M.S.]]
[[Category: Hasson MS]]
[[Category: Sanders, D.A.]]
[[Category: Sanders DA]]
[[Category: CIT]]
[[Category: GOL]]
[[Category: NA]]
[[Category: PO4]]
[[Category: acetate kinase]]
[[Category: actin) superfamily]]
[[Category: askha (acetate and sugar kinases]]
[[Category: butyrate]]
[[Category: butyrate kinase]]
[[Category: enzyme mechanism]]
[[Category: hsc70]]
[[Category: isobutyrate]]
[[Category: isobutyrate kinase]]
[[Category: two similar domains]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 05:55:04 2007''

Latest revision as of 09:42, 23 August 2023

Structure of butyrate kinase 2 reveals both open- and citrate-induced closed conformations: implications for substrate-induced fit conformational changesStructure of butyrate kinase 2 reveals both open- and citrate-induced closed conformations: implications for substrate-induced fit conformational changes

Structural highlights

1x9j is a 8 chain structure with sequence from Thermotoga maritima. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

BUK2_THEMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1x9j, resolution 3.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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