1x9j: Difference between revisions

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[[Image:1x9j.gif|left|200px]]


{{Structure
==Structure of butyrate kinase 2 reveals both open- and citrate-induced closed conformations: implications for substrate-induced fit conformational changes==
|PDB= 1x9j |SIZE=350|CAPTION= <scene name='initialview01'>1x9j</scene>, resolution 3.00&Aring;
<StructureSection load='1x9j' size='340' side='right'caption='[[1x9j]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
<table><tr><td colspan='2'>[[1x9j]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X9J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X9J FirstGlance]. <br>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Butyrate_kinase Butyrate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.7 2.7.2.7] </span>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
|GENE= buk2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x9j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x9j OCA], [https://pdbe.org/1x9j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x9j RCSB], [https://www.ebi.ac.uk/pdbsum/1x9j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x9j ProSAT]</span></td></tr>
|RELATEDENTRY=[[1saz|1SAZ]], [[1g99|1G99]]
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1x9j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x9j OCA], [http://www.ebi.ac.uk/pdbsum/1x9j PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1x9j RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/BUK2_THEMA BUK2_THEMA]
 
== Evolutionary Conservation ==
'''Structure of butyrate kinase 2 reveals both open- and citrate-induced closed conformations: implications for substrate-induced fit conformational changes'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x9/1x9j_consurf.spt"</scriptWhenChecked>
1X9J is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X9J OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Butyrate kinase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x9j ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: Diao, J S.]]
[[Category: Diao JS]]
[[Category: Hasson, M S.]]
[[Category: Hasson MS]]
[[Category: Sanders, D A.]]
[[Category: Sanders DA]]
[[Category: acetate kinase]]
[[Category: actin) superfamily]]
[[Category: askha (acetate and sugar kinase]]
[[Category: butyrate]]
[[Category: butyrate kinase]]
[[Category: enzyme mechanism]]
[[Category: hsc70]]
[[Category: isobutyrate]]
[[Category: isobutyrate kinase]]
[[Category: two similar domain]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:46:35 2008''

Latest revision as of 09:42, 23 August 2023

Structure of butyrate kinase 2 reveals both open- and citrate-induced closed conformations: implications for substrate-induced fit conformational changesStructure of butyrate kinase 2 reveals both open- and citrate-induced closed conformations: implications for substrate-induced fit conformational changes

Structural highlights

1x9j is a 8 chain structure with sequence from Thermotoga maritima. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

BUK2_THEMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1x9j, resolution 3.00Å

Drag the structure with the mouse to rotate

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OCA
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