1x7n: Difference between revisions

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OCA

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 ==The crystal structure of Pyrococcus furiosus phosphoglucose isomerase with bound 5-phospho-D-arabinonate and Manganese==
-<StructureSection load='1x7n' size='340' side='right' caption='[[1x7n]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
+<StructureSection load='1x7n' size='340' side='right'caption='[[1x7n]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1x7n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43587 Atcc 43587]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X7N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1X7N FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1x7n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X7N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X7N FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PA5:5-PHOSPHOARABINONIC+ACID'>PA5</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1plz|1plz]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PA5:5-PHOSPHOARABINONIC+ACID'>PA5</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pgiA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2261 ATCC 43587])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x7n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x7n OCA], [https://pdbe.org/1x7n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x7n RCSB], [https://www.ebi.ac.uk/pdbsum/1x7n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x7n ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucose-6-phosphate_isomerase Glucose-6-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.9 5.3.1.9] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1x7n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x7n OCA], [http://pdbe.org/1x7n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1x7n RCSB], [http://www.ebi.ac.uk/pdbsum/1x7n PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/G6PI_PYRFU G6PI_PYRFU]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x7/1x7n_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x7/1x7n_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x7n ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 30: / Line 31: @@
 ==See Also==
-*[[Phosphoglucoisomerase|Phosphoglucoisomerase]]
+*[[Phosphoglucose isomerase 3D structures|Phosphoglucose isomerase 3D structures]]
-*[[Phosphoglucose isomerase|Phosphoglucose isomerase]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Atcc 43587]]
+[[Category: Large Structures]]
-[[Category: Glucose-6-phosphate isomerase]]
-[[Category: Akerboom, J]]
-[[Category: Baker, P J]]
-[[Category: Berrisford, J M]]
-[[Category: Blackburn, G M]]
-[[Category: Brouns, S]]
-[[Category: Hardre, R]]
-[[Category: Murray, I A]]
-[[Category: Oost, J van der]]
-[[Category: Rice, D W]]
-[[Category: Salmon, L]]
-[[Category: Sedelnikova, S E]]
-[[Category: Turnbull, A P]]
-[[Category: 5-phospho-d-arabinonate]]
-[[Category: Cupin superfamily]]
-[[Category: Extremeophile]]
-[[Category: Hyperthermophile]]
-[[Category: Isomerase]]
-[[Category: Phosphoglucose isomerase]]
 [[Category: Pyrococcus furiosus]]
+[[Category: Akerboom J]]
+[[Category: Baker PJ]]
+[[Category: Berrisford JM]]
+[[Category: Blackburn GM]]
+[[Category: Brouns S]]
+[[Category: Hardre R]]
+[[Category: Murray IA]]
+[[Category: Rice DW]]
+[[Category: Salmon L]]
+[[Category: Sedelnikova SE]]
+[[Category: Turnbull AP]]
+[[Category: Van der Oost J]]