Proteopedia

1si1: Difference between revisions

← Older edit
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Crystal Structure of Mannheimia haemolytica Ferric iron-Binding Protein A in an open conformation==
==Crystal Structure of Mannheimia haemolytica Ferric iron-Binding Protein A in an open conformation==
<StructureSection load='1si1' size='340' side='right' caption='[[1si1]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
<StructureSection load='1si1' size='340' side='right'caption='[[1si1]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1si1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_33396 Atcc 33396]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SI1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1SI1 FirstGlance]. <br>
<table><tr><td colspan='2'>[[1si1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mannheimia_haemolytica Mannheimia haemolytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SI1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SI1 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1q35|1q35]], [[1si0|1si0]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fbpA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=75985 ATCC 33396])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1si1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1si1 OCA], [https://pdbe.org/1si1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1si1 RCSB], [https://www.ebi.ac.uk/pdbsum/1si1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1si1 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1si1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1si1 OCA], [http://pdbe.org/1si1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1si1 RCSB], [http://www.ebi.ac.uk/pdbsum/1si1 PDBsum]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9Z4N6_MANHA Q9Z4N6_MANHA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/si/1si1_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/si/1si1_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1si1 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 27: Line 29:
</div>
</div>
<div class="pdbe-citations 1si1" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1si1" style="background-color:#fffaf0;"></div>
==See Also==
*[[Ferric-binding protein|Ferric-binding protein]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 33396]]
[[Category: Large Structures]]
[[Category: Dougan, D R]]
[[Category: Mannheimia haemolytica]]
[[Category: McRee, D E]]
[[Category: Dougan DR]]
[[Category: Schryvers, A B]]
[[Category: McRee DE]]
[[Category: Shouldice, S R]]
[[Category: Schryvers AB]]
[[Category: Skene, R J]]
[[Category: Shouldice SR]]
[[Category: Snell, G]]
[[Category: Skene RJ]]
[[Category: Tari, L W]]
[[Category: Snell G]]
[[Category: Metal binding protein]]
[[Category: Tari LW]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/w/1si1"