5ho5: Difference between revisions

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<StructureSection load='5ho5' size='340' side='right'caption='[[5ho5]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
<StructureSection load='5ho5' size='340' side='right'caption='[[5ho5]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5ho5]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Magsq Magsq]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HO5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5HO5 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5ho5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Magnetospira_sp._QH-2 Magnetospira sp. QH-2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HO5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HO5 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.99&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mamB, MGMAQ_1061 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1288970 MAGSQ])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ho5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ho5 OCA], [http://pdbe.org/5ho5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ho5 RCSB], [http://www.ebi.ac.uk/pdbsum/5ho5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ho5 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ho5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ho5 OCA], [https://pdbe.org/5ho5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ho5 RCSB], [https://www.ebi.ac.uk/pdbsum/5ho5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ho5 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MAMB_MAGSQ MAMB_MAGSQ] Plays a dual, essential role in magnetosome formation; required for magnetosome vesicle formation as well as biomineralization (By similarity). Probably binds and transports iron (Probable). Requires heterodimerization with MamM for stability (By similarity).[UniProtKB:V6F510]<ref>PMID:29243866</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Magsq]]
[[Category: Magnetospira sp. QH-2]]
[[Category: Davidov, G]]
[[Category: Davidov G]]
[[Category: Keren, N]]
[[Category: Keren N]]
[[Category: Zarivach, R]]
[[Category: Zarivach R]]
[[Category: Zeytuni, N]]
[[Category: Zeytuni N]]
[[Category: C-terminal domain]]
[[Category: Cation diffusion facilitator]]
[[Category: Magnetotactic bacteria]]
[[Category: Metal transport]]
[[Category: Metallochaperone like domain]]

Latest revision as of 13:48, 16 August 2023

MamBMamB

Structural highlights

5ho5 is a 4 chain structure with sequence from Magnetospira sp. QH-2. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.99Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

MAMB_MAGSQ Plays a dual, essential role in magnetosome formation; required for magnetosome vesicle formation as well as biomineralization (By similarity). Probably binds and transports iron (Probable). Requires heterodimerization with MamM for stability (By similarity).[UniProtKB:V6F510][1]

Publication Abstract from PubMed

Magnetospirillum gryphiswaldense MSR-1 synthesizes membrane-enclosed magnetite (Fe3 O4 ) nanoparticles, magnetosomes, for magnetotaxis. Formation of these organelles involves a complex process comprising key steps which are governed by specific magnetosome-associated proteins. MamB, a cation diffusion facilitator (CDF) family member has been implicated in magnetosome-directed iron transport. However, deletion mutagenesis studies revealed that MamB is essential for the formation of magnetosome membrane vesicles, but its precise role remains elusive. In this study, we employed a multi-disciplinary approach to define the role of MamB during magnetosome formation. Using site-directed mutagenesis complemented by structural analyses, fluorescence microscopy and cryo-electron tomography, we show that MamB is most likely an active magnetosome-directed transporter serving two distinct, yet essential functions. First, MamB initiates magnetosome vesicle formation in a transport-independent process, probably by serving as a landmark protein. Second, MamB transport activity is required for magnetite nucleation. Furthermore, by determining the crystal structure of the MamB cytosolic C-terminal domain, we also provide mechanistic insight into transport regulation. Additionally, we present evidence that magnetosome vesicle growth and chain formation are independent of magnetite nucleation and magnetic interactions respectively. Together, our data provide novel insight into the role of the key bifunctional magnetosome protein MamB, and the early steps of magnetosome formation.

The dual role of MamB in magnetosome membrane assembly and magnetite biomineralization.,Uebe R, Keren-Khadmy N, Zeytuni N, Katzmann E, Navon Y, Davidov G, Bitton R, Plitzko JM, Schuler D, Zarivach R Mol Microbiol. 2018 Feb;107(4):542-557. doi: 10.1111/mmi.13899. Epub 2018 Jan 9. PMID:29243866[2]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Uebe R, Keren-Khadmy N, Zeytuni N, Katzmann E, Navon Y, Davidov G, Bitton R, Plitzko JM, Schuler D, Zarivach R. The dual role of MamB in magnetosome membrane assembly and magnetite biomineralization. Mol Microbiol. 2018 Feb;107(4):542-557. doi: 10.1111/mmi.13899. Epub 2018 Jan 9. PMID:29243866 doi:http://dx.doi.org/10.1111/mmi.13899
  2. Uebe R, Keren-Khadmy N, Zeytuni N, Katzmann E, Navon Y, Davidov G, Bitton R, Plitzko JM, Schuler D, Zarivach R. The dual role of MamB in magnetosome membrane assembly and magnetite biomineralization. Mol Microbiol. 2018 Feb;107(4):542-557. doi: 10.1111/mmi.13899. Epub 2018 Jan 9. PMID:29243866 doi:http://dx.doi.org/10.1111/mmi.13899

5ho5, resolution 1.99Å

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