2dpu: Difference between revisions

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OCA

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 ==Crystal structure of the replication termination protein in complex with a pseudosymmetric 21mer B-site DNA==
-<StructureSection load='2dpu' size='340' side='right' caption='[[2dpu]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
+<StructureSection load='2dpu' size='340' side='right'caption='[[2dpu]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2dpu]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DPU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DPU FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2dpu]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DPU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DPU FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1bm9|1bm9]], [[1j0r|1j0r]], [[1f4k|1f4k]], [[2dpd|2dpd]]</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rtp ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dpu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dpu OCA], [https://pdbe.org/2dpu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dpu RCSB], [https://www.ebi.ac.uk/pdbsum/2dpu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dpu ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dpu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dpu OCA], [http://pdbe.org/2dpu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dpu RCSB], [http://www.ebi.ac.uk/pdbsum/2dpu PDBsum]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/RTP_BACSU RTP_BACSU]] Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat.
+[https://www.uniprot.org/uniprot/RTP_BACSU RTP_BACSU] Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat.
 ==See Also==
@@ Line 14: / Line 14: @@
 __TOC__
 </StructureSection>
-[[Category: Bacillus globigii migula 1900]]
+[[Category: Bacillus subtilis]]
-[[Category: Vivian, J P]]
+[[Category: Large Structures]]
-[[Category: Wilce, J]]
+[[Category: Vivian JP]]
-[[Category: Wilce, M C.J]]
+[[Category: Wilce J]]
-[[Category: Dna binding protein-dna complex]]
+[[Category: Wilce MCJ]]
-[[Category: Dna replication]]
-[[Category: Protein-dna complex]]
-[[Category: Winged-helix]]