2dpu: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(12 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2dpu.jpg|left|200px]]<br /><applet load="2dpu" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2dpu, resolution 3.10&Aring;" />
'''Crystal structure of the replication termination protein in complex with a pseudosymmetric 21mer B-site DNA'''<br />


==About this Structure==
==Crystal structure of the replication termination protein in complex with a pseudosymmetric 21mer B-site DNA==
2DPU is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DPU OCA].  
<StructureSection load='2dpu' size='340' side='right'caption='[[2dpu]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2dpu]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DPU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DPU FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dpu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dpu OCA], [https://pdbe.org/2dpu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dpu RCSB], [https://www.ebi.ac.uk/pdbsum/2dpu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dpu ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RTP_BACSU RTP_BACSU] Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat.
 
==See Also==
*[[Replication Termination Protein|Replication Termination Protein]]
__TOC__
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Vivian, J P.]]
[[Category: Vivian JP]]
[[Category: Wilce, J.]]
[[Category: Wilce J]]
[[Category: Wilce, M C.J.]]
[[Category: Wilce MCJ]]
[[Category: dna replication]]
[[Category: protein-dna complex]]
[[Category: winged-helix]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:01:21 2008''

Latest revision as of 13:34, 16 August 2023

Crystal structure of the replication termination protein in complex with a pseudosymmetric 21mer B-site DNACrystal structure of the replication termination protein in complex with a pseudosymmetric 21mer B-site DNA

Structural highlights

2dpu is a 3 chain structure with sequence from Bacillus subtilis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.1Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RTP_BACSU Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat.

See Also

2dpu, resolution 3.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2dpu&oldid=3833765"