1pff: Difference between revisions

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-{{Seed}}
-[[Image:1pff.png|left|200px]]
-<!--
+==Crystal Structure of Homocysteine alpha-, gamma-lyase at 1.8 Angstroms==
-The line below this paragraph, containing "STRUCTURE_1pff", creates the "Structure Box" on the page.
+<StructureSection load='1pff' size='340' side='right'caption='[[1pff]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1pff]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichomonas_vaginalis Trichomonas vaginalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PFF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PFF FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-{{STRUCTURE_1pff|  PDB=1pff  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pff FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pff OCA], [https://pdbe.org/1pff PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pff RCSB], [https://www.ebi.ac.uk/pdbsum/1pff PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pff ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/O15565_TRIVA O15565_TRIVA]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pf/1pff_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pff ConSurf].
+<div style="clear:both"></div>
-===Crystal Structure of Homocysteine alpha-, gamma-lyase at 1.8 Angstroms===
+==See Also==
+*[[Methionine gamma-lyase 3D structures|Methionine gamma-lyase 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-PFF is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Trichomonas_vaginalis Trichomonas vaginalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PFF OCA].
+[[Category: Large Structures]]
-[[Category: Methionine gamma-lyase]]
 [[Category: Trichomonas vaginalis]]
-[[Category: Allen, T W.]]
+[[Category: Allen TW]]
-[[Category: Han, Q.]]
+[[Category: Han Q]]
-[[Category: Hoffman, R M.]]
+[[Category: Hoffman RM]]
-[[Category: Prasad, S G.]]
+[[Category: Prasad SG]]
-[[Category: Ramaswamy, S.]]
+[[Category: Ramaswamy S]]
-[[Category: Sridhar, V.]]
+[[Category: Sridhar V]]
-[[Category: Tan, Y.]]
+[[Category: Tan Y]]
-[[Category: Xu, M.]]
+[[Category: Xu M]]
-[[Category: Gamma-lyase]]
-[[Category: Homocysteine]]
-[[Category: Methionine]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 20:54:20 2009''