1oot: Difference between revisions

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-[[Image:1oot.gif|left|200px]]
- {{Structure
+==Crystal structure of the SH3 domain from a S. cerevisiae hypothetical 40.4 kDa protein at 1.39 A resolution==
-|PDB= 1oot |SIZE=350|CAPTION= <scene name='initialview01'>1oot</scene>, resolution 1.39&Aring;
+<StructureSection load='1oot' size='340' side='right'caption='[[1oot]], [[Resolution|resolution]] 1.39&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>
+<table><tr><td colspan='2'>[[1oot]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OOT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OOT FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.39&#8491;</td></tr>
-|GENE= YFR024C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae])
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-|DOMAIN=
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1oot FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1oot OCA], [https://pdbe.org/1oot PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1oot RCSB], [https://www.ebi.ac.uk/pdbsum/1oot PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1oot ProSAT]</span></td></tr>
-|RELATEDENTRY=
+</table>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1oot FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1oot OCA], [http://www.ebi.ac.uk/pdbsum/1oot PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1oot RCSB]</span>
+== Function ==
-}}
+[https://www.uniprot.org/uniprot/LSB3_YEAST LSB3_YEAST]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oo/1oot_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1oot ConSurf].
+<div style="clear:both"></div>
-'''Crystal structure of the SH3 domain from a S. cerevisiae hypothetical 40.4 kDa protein at 1.39 A resolution'''
+==See Also==
+*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-OOT is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OOT OCA].
+[[Category: Large Structures]]
 [[Category: Saccharomyces cerevisiae]]
-[[Category: Single protein]]
+[[Category: Kursula P]]
-[[Category: Kursula, P.]]
+[[Category: Lehmann F]]
-[[Category: Lehmann, F.]]
+[[Category: Song YH]]
-[[Category: Song, Y H.]]
+[[Category: Wilmanns M]]
-[[Category: Wilmanns, M.]]
-[[Category: sh3 domain]]
-[[Category: sturctural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:48:24 2008''