1k39: Difference between revisions

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-[[Image:1k39.jpg|left|200px]]<br /><applet load="1k39" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="1k39, resolution 3.29&Aring;" />
-'''The structure of yeast delta3-delta2-enoyl-COA isomerase complexed with octanoyl-COA'''<br />
-==About this Structure==
+==The structure of yeast delta3-delta2-enoyl-COA isomerase complexed with octanoyl-COA==
-K39 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae] with <scene name='pdbligand=PO4:'>PO4</scene> and <scene name='pdbligand=CO8:'>CO8</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Dodecenoyl-CoA_isomerase Dodecenoyl-CoA isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.3.8 5.3.3.8] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K39 OCA].
+<StructureSection load='1k39' size='340' side='right'caption='[[1k39]], [[Resolution|resolution]] 3.29&Aring;' scene=''>
-[[Category: Dodecenoyl-CoA isomerase]]
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1k39]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K39 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K39 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.29&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO8:OCTANOYL-COENZYME+A'>CO8</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k39 OCA], [https://pdbe.org/1k39 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k39 RCSB], [https://www.ebi.ac.uk/pdbsum/1k39 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k39 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/ECI1_YEAST ECI1_YEAST] Essential for the beta oxidation of unsaturated fatty acids.<ref>PMID:9837886</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k3/1k39_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k39 ConSurf].
+<div style="clear:both"></div>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Saccharomyces cerevisiae]]
-[[Category: Single protein]]
+[[Category: Geerlof A]]
-[[Category: Geerlof, A.]]
+[[Category: Hiltunen JK]]
-[[Category: Hiltunen, J K.]]
+[[Category: Mursula AM]]
-[[Category: Mursula, A M.]]
+[[Category: Wierenga RK]]
-[[Category: Wierenga, R K.]]
-[[Category: CO8]]
-[[Category: PO4]]
-[[Category: beta-beta-alpha spiral]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 13:29:37 2008''